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SCN18_13_7_16_R5_B_scaffold_6995_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(130..2241)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=53254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea thiooxidans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 703.0
  • Bit_score: 1342
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=2 Tax=Bosea thiooxidans RepID=Q6XBL2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 703.0
  • Bit_score: 1342
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 706.0
  • Bit_score: 1229
  • Evalue 0.0

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2112
GTCGCCGCCGCGCTGATCCCGTTCCTCGAGAACGACGACGCGAACCGCGCGCTGATGGGCTCGAACATGCAGCGCCAGGCGGTGCCGCTGGTCCGCGCCGACGCGCCCTTCGTCGGCACCGGCATGGAGGCCGCGGTCGCCCGCGACTCCGGCGCTGCCATCGCGGCCCGCCGCGCCGGTATCGTCGACCAGGTCGACGCGACTCGTATCGTCATCCGCGCTTCCGACGAGATGGACCCGACCAAGCCGGGCGTCGACATCTATCGTCTGCAGAAGTTCCAGCGCTCGAACCAGTCGACCTGCATCACGCAGCGTCCGCTGGTCCGTGTCGGCGACATCGTCAAGAAGGGCGACATCGTCGCGGACGGCCCGTCGACCGAGTTCGGCGAGCTCGCTCTCGGCCGCAACGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTGCTCTCGGAGAAGATCGTCTCGGAAGACATCTTCACCTCGATCCATATCGAGGAATTCGAGGTCATGGCCCGCGACACCAAGCTCGGCCCTGAGGAAATCACGCGCGACATTCCGAACGTCTCGGAAGAGGCGCTGAAGAACCTCGACGAAGCCGGCATCGTCTATATCGGTGCGGAAGTCGCCGCCGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTGCTGCGCGCCATCTTCGGCGAGAAGGCTTCCGATGTCCGCGACACCTCGCTGCGCGTCCCGCCGGGCGTGCAGGGCACGATCGTCGAAGTGCGCGTCTTCAACCGCCATGGCGTCGACAAGGACGAGCGCGCCCAGGCGATCGAGCGCGAGGAGATCGAGCGTCTCGCCAAGGACCGCGATGACGAGCAGGCGATCCTCGACCGCAACACCTTCGCGCGTCTGGCCGAGATCCTGACCGGCAAGACCGGTCTCGCCGGTCCGAAGGGCTTCAAGAAGGACACGGTCATCACCCGCGAGGCGATGAGCGAGTTCCCGCGTTCGCAGTGGTGGCTGTTCGCCACGGCGGATGACGCCCTGATGACCGAAATCGAGGCGATGCGGAAGCAGTACGACGAGTCGAAGAAGCGCCTCGAGCAGCGCTTCCTCGACAAGGTCGAGAAGCTGCAGCGCGGCGACGAACTGCCTCCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGATCCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTGGTCTCGCGCATCGTGCCGGCGGAGGACATGCCGTTCCTCGAGGACGGTACCCATGCCGACATCGTGCTGAACCCGCTCGGCGTGCCCTCGCGCATGAACGTCGGACAGATCCTGGAGACCCATCTGGGCTGGGCCGCGGCAGGCCTCGGCAAGCAGATCGGCAAGGCGCTCGACGCCTATCGCAAGGCGCATGATTCCAAGGCGCTGAGGGCCTCGTTCGAAGCGGTCTACGAGGACAACGAGATCGTTGCCTCGATGAACGACGACGAACTGGTCGAGATGGGCCAGAACCTGCGTCGCGGCGTGCCGATGGCGACGCCGGTGTTCAACGGCGCCAAGGAGGCCGATATCGAGCGGCTCCTGGAGCAGGCCGGGCTGCACAGCTCTGGGCAGTCCACGCTGTATGATGGCAGGACCGGCGAGCCTTTCGACCGCAAGGTGACGATGGGCTACATCTACATGCTGAAGCTGCACCACCTGGTCGACGACAAGATCCATGCGCGCTCGATCGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTCGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCCCTCGAAGCCTACGGCGCCGCCTACACGCTGCAGGAAATGCTGACCGTGAAGTCGGACGACGTCGCGGGCCGCACCAAGGTCTACGAGTCGATCGTGCGTGGCGAAGACAATTTCGAGGCCGGCATCCCGGAGAGCTTCAACGTGCTCGTCAAGGAAATGCGTTCGCTCGGTCTCAACGTCGAGCTGATCAGCAACAAGCCGAGGCCGGGCGAGCTGCCCCCGGCCGAGGCGGCCGAGTAA
PROTEIN sequence
Length: 704
VAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGTGMEAAVARDSGAAIAARRAGIVDQVDATRIVIRASDEMDPTKPGVDIYRLQKFQRSNQSTCITQRPLVRVGDIVKKGDIVADGPSTEFGELALGRNVLVAFMPWNGYNFEDSILLSEKIVSEDIFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVAAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERAQAIEREEIERLAKDRDDEQAILDRNTFARLAEILTGKTGLAGPKGFKKDTVITREAMSEFPRSQWWLFATADDALMTEIEAMRKQYDESKKRLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRIVPAEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWAAAGLGKQIGKALDAYRKAHDSKALRASFEAVYEDNEIVASMNDDELVEMGQNLRRGVPMATPVFNGAKEADIERLLEQAGLHSSGQSTLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVRGEDNFEAGIPESFNVLVKEMRSLGLNVELISNKPRPGELPPAEAAE*