ggKbase home page

SCN18_13_7_16_R5_B_scaffold_7226_3

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(1818..2183)

Top 3 Functional Annotations

Value Algorithm Source
Putative phytoene synthase (Terpenoid synthase) {ECO:0000313|EMBL:KFC74373.1}; EC=2.5.1.- {ECO:0000313|EMBL:KFC74373.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 119.0
  • Bit_score: 184
  • Evalue 4.70e-44
phytoene synthase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034D4F64 similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 122.0
  • Bit_score: 156
  • Evalue 9.80e-36
squalene/phytoene synthase similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 122.0
  • Bit_score: 154
  • Evalue 1.10e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
TATGCGCTGACGGGGCTGATGCGGGCGTTTCCCTGGCATGCGGCGGAAGGGCAGGTCTATCTGCCGGCCGACATCCTCGCCCGCAACGGCGTCACCCGCGAGGACATCGTGCGCGGGCGCGGCGGCCCCGGCGTCGACTACTCGCTGAAGGAATTGCGGGCGCTGGCGCGGATCCATCTGCGCAAGCTGAACGATCTCAGCGCGACCGTGCCGGCGGCGATCCGGCCGGCCTTCCTGCCGGTGGCGCTGGTCGAGCCCTATCTGAGGGTGATGGAGCGGCGCGGCTATGATCCCTACCGGACCATCGTCACGCTCTCGCCGCTGCGGCGGCAATGGACGCTCTGGCGCGCCTCGCGGGGGCGCTGA
PROTEIN sequence
Length: 122
YALTGLMRAFPWHAAEGQVYLPADILARNGVTREDIVRGRGGPGVDYSLKELRALARIHLRKLNDLSATVPAAIRPAFLPVALVEPYLRVMERRGYDPYRTIVTLSPLRRQWTLWRASRGR*