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SCN18_13_7_16_R5_B_scaffold_12025_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 2..721

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZFW0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 235.0
  • Bit_score: 318
  • Evalue 2.90e-84
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 235.0
  • Bit_score: 318
  • Evalue 8.30e-85
Shikimate dehydrogenase {ECO:0000313|EMBL:BAM92629.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 235.0
  • Bit_score: 318
  • Evalue 4.10e-84

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GCGGCCTTCGCCGAGCGCGGCCATGACGGCATCGTCGCGCCGGTCCGCGTGGCGCCCGATCATCTCGAGGCCTTCCTCAAGGCCGCCGACCACGTGCCGAATCTCGATGGAGTCATCGTCACGGTGCCGCATAAGTTCGCCTGCCATCGGCACTGCGCCAGCGCGACCGAGCGCGGCGATTTCCTCGGCGCGGTCAACATCATGCGCCGCCGCAAGGATGGCGGCTGGCACGGCGAGATGGTCGACGGGCTCGGCTTCGTCGGCGCGGTCAAGGCCAATGGCGGCGAGCCCGAAGGCAAGCGCGCCCTGCTGATCGGCGCCGGCGGCGCGGGCTCGGCCATCGCCCTCGCGCTCGTCGATGCCGGCGTCAGCGAGCTTGCGATCCATGATGCGGACACCGCCCGCCGCGACAGCCTGATCGAGCGGCTGAACAGCAAGGGCAAGGCGAAGGTCTTCGCCGGCTCGCCCGACCCGACCGGATTCGATCTCGTCGCCAATGCCACGCCCGCCGGCATGAAGCCGGGCGACGCGCTGCCGGTTGAGGTCGACAAGCTCTCGCCCGAGACCTTCGTCGGTTGCGTCATCACCGTTCCGGCGATCTCGCCGCTGATCGAGGCGGCCCGCGCCCGCGGCTGCCGGACCTCGACCGGCACGCAGATGTATCAGGCGCTGCAGAACGCGATGGTGGAGTTTCTGCTCGCGGGCGAGCGCATCGGCTGA
PROTEIN sequence
Length: 240
AAFAERGHDGIVAPVRVAPDHLEAFLKAADHVPNLDGVIVTVPHKFACHRHCASATERGDFLGAVNIMRRRKDGGWHGEMVDGLGFVGAVKANGGEPEGKRALLIGAGGAGSAIALALVDAGVSELAIHDADTARRDSLIERLNSKGKAKVFAGSPDPTGFDLVANATPAGMKPGDALPVEVDKLSPETFVGCVITVPAISPLIEAARARGCRTSTGTQMYQALQNAMVEFLLAGERIG*