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SCN18_13_7_16_R5_B_scaffold_13176_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 104..1129

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat protein n=1 Tax=Burkholderia pseudomallei MSHR346 RepID=C4KP56_BURPE similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 317.0
  • Bit_score: 235
  • Evalue 4.70e-59
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP19250.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 319.0
  • Bit_score: 239
  • Evalue 4.60e-60
TPR repeat protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 317.0
  • Bit_score: 235
  • Evalue 1.30e-59

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGTCGTTCGACGTCGCCGCCGAGGCGTACGACCGGTTCATGGGTCGCTTCTCGCAGCCGCTCGCCGAGGAGTTCGCGACCTGGGCGCGACTCCCCGAATCCGGACGCGCGCTCGACGTCGGCTGCGGGCCGGGTGCGCTGGTCGCCGTCCTCGCGACGCGACTCGGCGAGCGCAGCGTCTCGGCGATCGACCCGTCCGCGTCGTTCGTCGCCGCGGCGCGCGAGCGCTTCCCCGCCGCGGACGTGCGCGAGGCCTCGGCCGAGGACCTCCCGTTCCCCGACGCATCGTTCGACGCGACCCTGGCCGCGCTCGTCGTCCACTTCATGACGGATGCCGCGGTCGGCGTCCGCGAGATGGTCCGCGTCACCCGGCCCGGCGGGGTGGTCGCCGCGTGCGTGTGGGACTTCGCCGGGGGCCGGGCTCCGCAGACGGCGTTCTTCCGCTCGCTCTCGACGGTCGCCGACGACGGGGACGGTATCTCACCGGACGACCTCGCCCGCGTTCTGCTTCCCTTCGAACAGGCCGTCCCGCTCGCCACGCGGCCGGTCCTTTTCGCCCTGGCACGGTGCCTGGCGGAAGCCTGGCCGGCGGATGCTTCGCGCCAGACGCTGCTCACGCGCGCCTTCCGCGCCAAGGAGGCCGACGAATCGCATCGCGCCCGCCTGCGGGTGGAGATCGGGCGGCTACGCGCCGCGTTGCATGGGCTGGCGCAGATCGACGCGACCGGGCGAGGCTTCGTCCTGAAGCCGCACCGCGCGGACGCAGTGGTAGTCCTGGCCCGGCCGCGGGAAGAGCCGCATGAGGATGTGCTCGCCCTGCTCGCCGACGGCGAGGCTTGGTCGAGCTCTGCGCTGGCGTTGGCGCTCGACACCAGCCAGCGCAACATGCAGCGCATGCTCGAAGCGCTGGCCGCCGCCGGCCGGATCCAGTCCTTCGGCAAGGCCCGGGCGCGGCGCTGGCTGACGCCGCCGGTGCCCGGTTTCCCGACAAGCTTGTTACTCCCGGCTCCGCCGTCGGATGGCTAG
PROTEIN sequence
Length: 342
MSFDVAAEAYDRFMGRFSQPLAEEFATWARLPESGRALDVGCGPGALVAVLATRLGERSVSAIDPSASFVAAARERFPAADVREASAEDLPFPDASFDATLAALVVHFMTDAAVGVREMVRVTRPGGVVAACVWDFAGGRAPQTAFFRSLSTVADDGDGISPDDLARVLLPFEQAVPLATRPVLFALARCLAEAWPADASRQTLLTRAFRAKEADESHRARLRVEIGRLRAALHGLAQIDATGRGFVLKPHRADAVVVLARPREEPHEDVLALLADGEAWSSSALALALDTSQRNMQRMLEALAAAGRIQSFGKARARRWLTPPVPGFPTSLLLPAPPSDG*