ggKbase home page

SCN18_10_11_15_R4_B_scaffold_100_40

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(44310..45365)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=3 Tax=Dehalococcoides mccartyi RepID=A5FQW3_DEHSB similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 349.0
  • Bit_score: 336
  • Evalue 2.60e-89
hydrophobic amino acid uptake transporter (HAAT) family, permease similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 349.0
  • Bit_score: 336
  • Evalue 7.40e-90
Tax=CG_Desulfob_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 353.0
  • Bit_score: 346
  • Evalue 2.70e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGTACAAGAAACCCTGCGGCGTCTTCGACGAGAGCTACGAGCAGGACAGCGCGCTGGTCCGCACCGGCTATCGCTGGTCCATGCTGGTGCTGCTTCTGGCGATCCTGTTCGTCGCGATCCCGCTGCTTGCCGGCAACTACGTGCTGGACGTGCTCAACAATATCGCGATCACCCTGATCGCGGCTCTCGGGCTGCAGATCGTCATCGGCTTCACCGGGCAGATCAGCCTCGGCCACGCCGCCTTCATGGCCGTCGGCGCCTACACGAGCGCCATGTTGTCCACGCATCTGGGCCTCTCCTTCTGGATCGCCATGCCGCTCGCCGCGCTGACTGCCGGCCTGCTCGGCATCGTCATCGCCATGCCCGCCCTGAGGATCCGAGGCTTCTACGTCGCCGTGACGACGCTCGCCGCGCACTACGTGATCATGTGGGTCATCCTCCACGGCGGCGACCTGACCAAGGGAATATCCGGCCTGACCGCCGGCGAGATCACCATCGGCAGCTTCGTCTTCGATACCGAGCTGAAGTTCTATTTCCTCGTCATGTCGCTCGCCGCGCTCGCCGTGTTCTTCACCAGCAACGTCATGCGCACGAAGATCGGCAGGGCCATGATCGCGGTGCGCGACAACGACCTTGCCGCCGGCTTCATGGGCATCAACGTCTTCAGGACGAAGGTCGTCTCCTTCTTCCTGTCGTCCCTGTATGCGGGCGTGGCCGGCTCGCTGCTCGCCCACTATCAGGGCATCATCACGGTCGACCAGTTCACGCTGATGGACTCGATCTGGATCCTCGCGATGCTGGTCGTCGGCGGCGCGACGATCACCGGCGTCATCATGGGCGTCGTCTTCTTCAAGCTCCTCAGCCAGGTGGTGCTGTTCGGCGGCCCGCTGGTCGGAAGCATGTTCCCCAGCTTCGGAGGGTCCGCCGTCTCCGCCGGCATGCAGATCCTGTTCGGCGTCGTCGTCATCCTTTTCCTGATCTTCGAACCGAGAGGCCTTTCCCACCGCTGGCAGATAACGCTGTCGACGTTCCGACTGTGGCCGTTCCCTCACTAG
PROTEIN sequence
Length: 352
MYKKPCGVFDESYEQDSALVRTGYRWSMLVLLLAILFVAIPLLAGNYVLDVLNNIAITLIAALGLQIVIGFTGQISLGHAAFMAVGAYTSAMLSTHLGLSFWIAMPLAALTAGLLGIVIAMPALRIRGFYVAVTTLAAHYVIMWVILHGGDLTKGISGLTAGEITIGSFVFDTELKFYFLVMSLAALAVFFTSNVMRTKIGRAMIAVRDNDLAAGFMGINVFRTKVVSFFLSSLYAGVAGSLLAHYQGIITVDQFTLMDSIWILAMLVVGGATITGVIMGVVFFKLLSQVVLFGGPLVGSMFPSFGGSAVSAGMQILFGVVVILFLIFEPRGLSHRWQITLSTFRLWPFPH*