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SCN18_10_11_15_R4_B_scaffold_100_47

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(55868..56518)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcription regulator n=1 Tax=Variovorax sp. DB1 RepID=I3RYF3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 213.0
  • Bit_score: 192
  • Evalue 3.80e-46
Putative transcription regulator {ECO:0000313|EMBL:AFK33040.1}; TaxID=1179817 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. DB1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 213.0
  • Bit_score: 192
  • Evalue 5.30e-46
regulatory protein, TetR similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 209.0
  • Bit_score: 186
  • Evalue 4.50e-45

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGCGGAGGTTGCAAGACGACGCGGCCGTCACAAGCGCACGGATGCACTGATCGCCGCGCGCCGCCAGCAGGTGTGCGATGCGGCGATTCCGCTGTTCGTGGAGAAGGGCTTTCACGGCACCACGATCGAGGCCGTGGCGCACGCCGCCAATGTCAGCGCCGGCTTGATCTACAAGTACTTCAAGGACAAGGAAGACCTCCTCTACTACGCCTTCAACGAGCTGCTGGAGGACTATTCGACGGAGATTCCCAGGGCTGCTGCGCTGGTGAAGGGGCCGATCGAGAAGTTCCGGGCCTCGGTGCACGCCTATGCAAGGGTCGTCGACAAGCGCAAGCGCACGGTACTGCTCGGCAACCGCGCCTCGCACTCCCTCGGCCGCGATCGGCTCAAGCTGATCATGCAGAAGGAAGTCGAGATCAACAACCTGATCAGCAAGGCCGTCGAGGAGTGCATCGCCGCCGGCGCGTTCAGGCAGATCGACGCGCAGATGTTCAGCTACCAGGTTGTCGTGTTCGTCAATTCATGGCCGCTCGAGGCGTGGCGCCTGCCGCGCCCGCTGTCGATCGAGCAGTTCGTGGATCGTGGCTTGGCGCTGATGCTGCTGGCGGTCGAGGCCAGGCCGAGCCTGGCCGAAGTCGAGACCGCGTAG
PROTEIN sequence
Length: 217
MAEVARRRGRHKRTDALIAARRQQVCDAAIPLFVEKGFHGTTIEAVAHAANVSAGLIYKYFKDKEDLLYYAFNELLEDYSTEIPRAAALVKGPIEKFRASVHAYARVVDKRKRTVLLGNRASHSLGRDRLKLIMQKEVEINNLISKAVEECIAAGAFRQIDAQMFSYQVVVFVNSWPLEAWRLPRPLSIEQFVDRGLALMLLAVEARPSLAEVETA*