ggKbase home page

SCN18_10_11_15_R4_B_scaffold_100_90

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 107818..108894

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE3E0B related cluster n=1 Tax=unknown RepID=UPI0003CE3E0B similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 370.0
  • Bit_score: 485
  • Evalue 2.70e-134
type VI secretion protein, vc_a0111 family similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 358.0
  • Bit_score: 485
  • Evalue 1.30e-134
Type VI secretion protein {ECO:0000313|EMBL:ESY89941.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 370.0
  • Bit_score: 485
  • Evalue 3.80e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGCCGATGACGCTCGGCAACCGCCACCTGATCTGAAGCCGGCCGGCCCGCGCGGGCACGGCGGGGTGAACGCCTCCTTCGACTTCTTCGAGCTGCTGCGGCAACTGGAGAGCGGCGACAAGCGCTTCGGGCAGAAGGGCGGCCCCGAGCGCGAGCCGGCGCGGCTCGGCCAGCAGATCCGGCTCGGCTTCGCGACGCAGGACGTGGCCGAGTACGAGGAGGCGTCCGGCGGGCGGGCGCCGCAGGTGACGATCGCCAATCTCGGCCTGCTAGGCCCCGAAGGCCCGATGCCGATCCACATCACGCGCTGGGTGCTCGACCGGCTGTCGCAGCGCTGGTTCGCCGGGGCCGAGGCGCGCCAGACGGCCGACACAACCTTCGTCGACTTCGTCAACATGCTGCAGCACCGCATGATGGCGCTCTACTATCGCGCCTGGGCGGACCACAGCCCGGCGGTGCAGGTGGAGCGTCCGGTCAGCGGGCGCGTGCGCGCCATGCTGGAAGCCATGGCAGGCATCGGCCTGCCCGGCACGCACAATGGCGAGGACCCCTCGCTCGACATGGTCAAGCTGAAGCAGGCCGCCGCGCTCGCAAGCCAGGTCGACGGGCCCGAGCGCCTCACCCTGTTCATCTCCGAGGCCTTCGACGTGCCCGTGGCGATCAAGGAATTCGTCGCCGCGTGGGTGCCGATCCCGCGCGGCCTGCAAAGCCGGCTCGGGCAGGCCTACGCCGTGCTCGGCGGCGGCGCGACGGTCGGAAGCCGGACCTTTTCCCGGCAGAGCCGGGTCGAGCTGGTGATCGGCCCCGTGGGCATCAGGGACTACCTGTCCTTCCTGCCCGACGGGGACCGACATCCGGCCCTGAAGCGCGCCATCCGCGACCTCGTCGGCGAGCAGATCGACGTCGACGTGCGCGTCGTCCTCAGGCAAGCGGAGGTGCCCAAGCCGAACCTCGGCAGCGTCCGGCTGGGGCGGACGAGCTGGCTTGCGCGCCCGGATGAAAAGGGGGATGCTGACGAGATGCGACTGCGGGCAGTCGTCGGTTGGCGGCCCGAAAACCCAGGGGCAGGCGCATGA
PROTEIN sequence
Length: 359
MADDARQPPPDLKPAGPRGHGGVNASFDFFELLRQLESGDKRFGQKGGPEREPARLGQQIRLGFATQDVAEYEEASGGRAPQVTIANLGLLGPEGPMPIHITRWVLDRLSQRWFAGAEARQTADTTFVDFVNMLQHRMMALYYRAWADHSPAVQVERPVSGRVRAMLEAMAGIGLPGTHNGEDPSLDMVKLKQAAALASQVDGPERLTLFISEAFDVPVAIKEFVAAWVPIPRGLQSRLGQAYAVLGGGATVGSRTFSRQSRVELVIGPVGIRDYLSFLPDGDRHPALKRAIRDLVGEQIDVDVRVVLRQAEVPKPNLGSVRLGRTSWLARPDEKGDADEMRLRAVVGWRPENPGAGA*