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SCN18_10_11_15_R4_B_scaffold_100_107

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 128376..131876

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Rhizobium loti RepID=UPI00035E1C7F similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 1174.0
  • Bit_score: 1328
  • Evalue 0.0
Type VI secretion protein icmf {ECO:0000313|EMBL:AID31676.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 1174.0
  • Bit_score: 1327
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 1175.0
  • Bit_score: 1319
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3501
ATGATCTGGCTGCTTCGTCTTTTCGGGCTGGTCGCGCTCGCGGGCTTCGCCGCCGCGGTGTGGTATGCGGGGCCGCTGATCAGCTTCAACAACAGGCCGGTGCTGGAGTCGGAGTGGAGCCGGCTGGCGGTCATCGCGGTGGCCGCCGGGCTGGTGCTCGCCTACTACGGAACGCAGCTGCTGCGGGCCCGCGCCGCGCAGAAGCGGCTCGAGCTCGCCCTGGCGCAGGGCAGTGCGGAGGAGAGCGACGCGGGCGTGCTGGAAGCCCGCATGGCGGAGGCGGTCGAGAGGCTGAAAAGCGCGACCGGAAAGCGAACCTTCCTCTACGAGCTGCCCTGGTACGTGATCATCGGCCCGCCGGGCGCCGGCAAGACCACGGCGCTCGTCAATTCGGGCCTGAATTTCCCCCTCGCCGGCTCGGGCGTCGCGCAGCCGGTGGCCGGCGTCGGCGGCACGCGATATTGCGACTGGTGGTTCACCGACGAGGCGGTGCTGGTCGACACCGCCGGGCGGTACACGACGCAGGATTCGGACGCACGGCGCGATGGCAAGAGCTGGCTCGCCTTCCTCGCGGGGCTGAAACGCTCCCGCCCGACGCAGCCGCTCAACGGCGTCATCCTGGCCTTCAGCATACAGGACCTGATCACGCTCAACGGCCAGGAGCTGGGCGCGCATGTCAGCGAGATCCGCAACCGGCTGCGCGAGATCCACGAGACGCTGCGGATCGGCTTCCCGGTCTACGTGTTGTTCACCAAGGCGGACCTCGCCAAGGGGTTTTCCGAGTTCTTCGACGATCTCGACGAAACGGCCCGCCGCCAGGCCTGGGGCGCCACGTTCCGGCCCGGCGAGACAGCGGCGGACGCCCCTGCCCTGTTCGACGGACTGTCGGCGCGGCTGTCGCAGGAGACGACCGACCGGCTGGCCGAAGCCGGCGACCTGCCGGGCCGCAACGCCATCTTCGGCTTCGCCTCCCAGTTCGAGGCGCTGAAGGAGCCGATCCTCAACTTCCTGAACGGGGTGTTCGAGCCGGCACGGCCGCCGGTGCCGGCGACGTTGCGAGGCTTCTACTTCTCGTCGGGAACCCAGGAAGGGACGCCGATCGACCGCTTCCTCGGCACGGTCGGCCGTGCGTTCGGCGGCAGCGGCGAGGCGAGGCTCTCGGGGACCGGCAAGAGCTTCTTCCTGCACGACGTGCTCGGCAAGGTCATCTTCGGTGAATCCGGCCTGGTCTCCTCCGACGCCGCGCTGGAGCGGCGCGCGGCCTATCTGCGATATGGCGGAATGGCGGCGGTCGCGCTCGCCGCCCTCGCCCTGCTCGGCATCATCGGGTCGAGCTTCCTGGCCAACCGGCAGCTCGTCGCCGCCACCGGCGAGGCCGTCGGCCAGTACAATGCCGCCGCGCAGCCGCTGCTCGCCGCGCCGGCCGTGGCCGACACGGATTTCGAGACGGTGATCGGCGCGCTCGACGAGGTCCGCAGCCTGCCGGCCGGCTACGACAACCGGACCCCGGCCTCGACGCTCGAACAGGGCCTCGGGCTGGGCCAGCGCGACCGGCTGGTGTCGGCCTCCGAGCATACCTACCGGGCCGCGCTGGAGCAGATGTTCCGGCCGCGCCTGCTGCTCTACCTGGAACGCGCGATAGACAAGGAAAAGGCGAACGCAGTCGCTCTGTACGAACCGCTCAAGGTCTATCTGACGCTCGGCGGCAAGGCGCCGCGCAGCAATGACGACCTCGTCATCTCCTGGTTCGCGCGCGAATGGCAGACCCTCTATCCCGGCCCGCAGAACCGCACCGGCCGCGAGCAGCTCGTACGGCACCTTCGCGCCATGCTGTCGCTCGACGACGCGTTCAATCCGAACTACGACCTCAACCAGCCGCTGATCGAGGGCGCGCAGCGGTCGCTCGGCCAGCTCACGCTGGCGCAGCGCGCAGCGGCGATCATGGGATCGGTGCGTCGCACGGCGGAACCCTATGACCTCTCCCTCGGGCAGCGCGCCGGCGGCGAAGCGCCGGTGGTGTTCGAGACCCTCTCGGGCGAGAGCATCAACGCCCTGCGCGTGCCCGGGCTGTATACCTACACCGGCTTCAGGAACGTCTTCCTGAAACAGCTTTCGCAGGTCGCCCAGCGGCTCGTCGACGAGCGCTGGGTCATCGGCTCCGGCGGCGAGCAGATCGACCTCGGCGCGGAGCTGCCGCAGCTCGGTCCCGAGCTGGTCGACGGCTACGGCAAGGAGTTCGTGGCCGCCTGGAACAAGGAACTCGCCAAGCTCAAGTTCAAGCCGATGGCGGAGGACAAGCCGGACTACATCCGGCTTTCGGCCGCGGCGAATGCCGATTCGCCGATCGTGCGCCTCGTCGAGGCGGTCGCGGCCGAGACCGCGCTGACGCGCGACCTCGCCGCCCTCGGGGAAGGAGACGCCGGCGCGGCGCTGGCGGAAGGGCTGCGCAAGATCGGGATCGTCCTGCCCGGCGGGAAATCGCAGAACCGCGCGGGCTCGACCGACGTCTCCGTCGGCCGCAATCCCGGCGCCGCGATCGAGGCGCAGTTCCGCCCCTGGCAGGAGATCGTCGGCGGTCCGCCGGGACGCCGCCCGATCGACTCGCTGACGCGCAATCTGCGCGACATCTACCAGAGCCTGCTGGTGTCGGCCTCGCTGCCGGCGCGGGCGGAGGGGATCGATTCCAACCTCCAGCTCCAGATCTCGAACCTGCGCGCCAATGCCTCGCGCCTGCCGCGCACGCTGGGCCACATGGTCGCGGCAATCGCCGACGAGATGGAGGGCGACGCCGCCGAAACCTCGATCCAGCAGCTCACCAAGAAGCTGAACGAGACGGTGACGGCGGCCTGCGAGGCGGCGATCGCGAACCGCTATCCCTTCGTCCCGACGAGCAGCGAGGACGTCCCGCTCGCCGATTTCTCCAGCCTGTTCGCTCCGGGCGGCACGCTCGACCGCTTCTTTGCCCAGAACCTCTCGGTCCTGGCCGACACCAGCGGCTCCGCCTGGCAATGGCGGCAGGACACCCGCCTCGGGCGGGAATTGTCCCCGGAGACGCTGCGCAACTTCCAGCGCGCCGCCGAGATCCGCGACGCCTTCTTCTCGGGCTCGCAGCCCAATCCCGCCGTCACGCTGACCATCACCCCCTTCTCGCTCCACCGCGACGCCGACGTCGCGACGCTGGATGCCGAGGGACAGGTGATCCAAAGCTACCAGACCGGCAACAGCCCGAGCCAGTTGCTGTGGCCGGGCGCGGGCAGCGGCAGGGTGCGGCTCAGCCTGTCGCCGGAGCTTCCCGGCCGCGATTCGGCGATCAGGTTCGAGGGCCCGTGGGCATTGAAGCGGCTGCTCGACCAGGCGACCTTCAAGAGCGAGGGCGACAGGCTGGAGATGCGTTTCCTGATCGGCGGCCGCGACGTCGCCTACACGGTCGCGACGGACCGCGGCGGGCAGCCGCTCGGCGGCCCCGCCCTTTCGGCGTTCAAGTGCCCGCAGAACCTGTGA
PROTEIN sequence
Length: 1167
MIWLLRLFGLVALAGFAAAVWYAGPLISFNNRPVLESEWSRLAVIAVAAGLVLAYYGTQLLRARAAQKRLELALAQGSAEESDAGVLEARMAEAVERLKSATGKRTFLYELPWYVIIGPPGAGKTTALVNSGLNFPLAGSGVAQPVAGVGGTRYCDWWFTDEAVLVDTAGRYTTQDSDARRDGKSWLAFLAGLKRSRPTQPLNGVILAFSIQDLITLNGQELGAHVSEIRNRLREIHETLRIGFPVYVLFTKADLAKGFSEFFDDLDETARRQAWGATFRPGETAADAPALFDGLSARLSQETTDRLAEAGDLPGRNAIFGFASQFEALKEPILNFLNGVFEPARPPVPATLRGFYFSSGTQEGTPIDRFLGTVGRAFGGSGEARLSGTGKSFFLHDVLGKVIFGESGLVSSDAALERRAAYLRYGGMAAVALAALALLGIIGSSFLANRQLVAATGEAVGQYNAAAQPLLAAPAVADTDFETVIGALDEVRSLPAGYDNRTPASTLEQGLGLGQRDRLVSASEHTYRAALEQMFRPRLLLYLERAIDKEKANAVALYEPLKVYLTLGGKAPRSNDDLVISWFAREWQTLYPGPQNRTGREQLVRHLRAMLSLDDAFNPNYDLNQPLIEGAQRSLGQLTLAQRAAAIMGSVRRTAEPYDLSLGQRAGGEAPVVFETLSGESINALRVPGLYTYTGFRNVFLKQLSQVAQRLVDERWVIGSGGEQIDLGAELPQLGPELVDGYGKEFVAAWNKELAKLKFKPMAEDKPDYIRLSAAANADSPIVRLVEAVAAETALTRDLAALGEGDAGAALAEGLRKIGIVLPGGKSQNRAGSTDVSVGRNPGAAIEAQFRPWQEIVGGPPGRRPIDSLTRNLRDIYQSLLVSASLPARAEGIDSNLQLQISNLRANASRLPRTLGHMVAAIADEMEGDAAETSIQQLTKKLNETVTAACEAAIANRYPFVPTSSEDVPLADFSSLFAPGGTLDRFFAQNLSVLADTSGSAWQWRQDTRLGRELSPETLRNFQRAAEIRDAFFSGSQPNPAVTLTITPFSLHRDADVATLDAEGQVIQSYQTGNSPSQLLWPGAGSGRVRLSLSPELPGRDSAIRFEGPWALKRLLDQATFKSEGDRLEMRFLIGGRDVAYTVATDRGGQPLGGPALSAFKCPQNL*