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SCN18_10_11_15_R4_B_scaffold_295_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 1..366

Top 3 Functional Annotations

Value Algorithm Source
Nodulation protein d1 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R5Z8_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 112.0
  • Bit_score: 90
  • Evalue 1.10e-15
Nodulation protein D I {ECO:0000313|EMBL:GAJ37963.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 117.0
  • Bit_score: 90
  • Evalue 1.60e-15
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 122.0
  • Bit_score: 79
  • Evalue 5.60e-13

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATCAGCCGCGAGGCGCTGGCCGCCCTGCCCCACGTCGCCGTCGAGTTCGAGCGCCAGCGCGCGCCGTCGGCCGTCCAGTGGGTGCACGAGCGGCTCGGCCGCGCCTTGCAGCGCGCCATCACGGTTGCCAATTACGGCTCGGTGCCCTTCCTGCTGGTCGGCACGGAGCGCATCAGCCTGATGCATGCGCGCATGGCCGGCATGTTCGCCGCGCTGCTGCCGCTCAGCATCGTCGAGCTGCCCGTCGAGATCCCGCGCATCGTCGAGGTGATCCAGTGGCGCGGCGCCAACGATGCCGACGAGGGGCTGATGTGGGTTGTTGATATGATCGCCACGCTTGCACCGGGCTTGACCGATCAGGCTTAA
PROTEIN sequence
Length: 122
ISREALAALPHVAVEFERQRAPSAVQWVHERLGRALQRAITVANYGSVPFLLVGTERISLMHARMAGMFAALLPLSIVELPVEIPRIVEVIQWRGANDADEGLMWVVDMIATLAPGLTDQA*