ggKbase home page

SCN18_10_11_15_R4_B_scaffold_206_20

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 19473..20753

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P130_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 419.0
  • Bit_score: 448
  • Evalue 7.50e-123
Uncharacterized protein {ECO:0000313|EMBL:KJF71778.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 415.0
  • Bit_score: 547
  • Evalue 1.30e-152
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 421.0
  • Bit_score: 398
  • Evalue 1.90e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGCACAAGCCGACACGCCTGGCTGACGGAATCTCGCGCAGGCTGTTCCTGGGCGCAGCCGCCGCGCTGGCCGCGCCTGCCGTCCTGAGGGTCAGCAAGTCCTTCGCCGCCGATCCGGTCCGGATCGGCTTGGTAACCCCGCAGACCGGGCCGCTCGCCTTCTTCGGCGCGCCGGACCCGTTCATCCTCAAGCGCTTCGAGAAGCAGATCGCGGCCGGCATCCAGGTCAAGGGCGAGACGCGGCCCGTCGAGTTCGTCATCAAGGACAGCCAGTCGAGCGCCAACCGCGCCTCCGAGGTCGCGAGCCAGTTGATCCTCGACGACGAGGTCGACCTGCTGATCTCCGCCGGCGGGCCGGACACCGTCAACCCGGTGGCCGACCAGGCCGAGGTCAACGGCGTGCCGCTGGTCGCCAACAACTGCCCGTGGCAGCCCTTCGTGTTCGGCCGCAACAGCACGCCCGACAAGGGCTTCGACTGGACCTGGCTGTTCGCCTTCGGCCTCGAGGACGTGATCGCCGCCTACATGGCGCTGTGGGGCACGATCGAGACCAACAGGAAGGTCGGCATGCTGTTCGCCAACGACGCGGACGGCAATGCCTGGGGCGACGCCCAGTTCGGCTTCCCCGCCGCGCTCGCCAAGGCCGGCTATGAAGGCGTCGATTCCGGCCGCTACACGCCGATGGCGGAGGACTACACCGCCCAGATCACCGCCTTCAAGAACGCCGGCGTCGACATCGTGGTGGCCACGATGGTGCCGCCCGAGTTCTTCGCCTTCTGGACACAGGCCGCCCAGCAGGGCTTCAAGCCGAAGGTCGCCACCATCGGCAAGACGCTGCTCCTGCCGCAGACGTTGGAGACGATCGGTGCCATCGGCAACGGCCTGTCGACCGAAGTGGGCTGGCACCGCACCTTCCCCTACAAATCGCAGGTGACGGGCGAAACCGCGCCGGACCTGTGCGACGCGTGGGAGAAGGAGACGGGCAAGCCGTGGATTCAGCTCATCGGCTCCAAGCACGCTCTGTTCGAGGTCGCGCTCGATGTGCTGTCGCGCGCCGGCGATCCGGGCGACCGCGACGCCGTCGTCGAAGCGATCAGGGCGACCGACCACGAGACGCTTTCCGGCCGGGTCAAATGGGAAGGCTCGCCGATCCGCAACGTCACCAAGACGCCGATCGTCGGCGGCCAGTGGATGAAGAACGGCGACCGCTTCGACCTCGTCATCCGCGCCAACCCCACCGACCAGCCGATCCCCACCGAGGGCGGCCTGGCGGCGCTGTGA
PROTEIN sequence
Length: 427
MHKPTRLADGISRRLFLGAAAALAAPAVLRVSKSFAADPVRIGLVTPQTGPLAFFGAPDPFILKRFEKQIAAGIQVKGETRPVEFVIKDSQSSANRASEVASQLILDDEVDLLISAGGPDTVNPVADQAEVNGVPLVANNCPWQPFVFGRNSTPDKGFDWTWLFAFGLEDVIAAYMALWGTIETNRKVGMLFANDADGNAWGDAQFGFPAALAKAGYEGVDSGRYTPMAEDYTAQITAFKNAGVDIVVATMVPPEFFAFWTQAAQQGFKPKVATIGKTLLLPQTLETIGAIGNGLSTEVGWHRTFPYKSQVTGETAPDLCDAWEKETGKPWIQLIGSKHALFEVALDVLSRAGDPGDRDAVVEAIRATDHETLSGRVKWEGSPIRNVTKTPIVGGQWMKNGDRFDLVIRANPTDQPIPTEGGLAAL*