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SCN18_10_11_15_R4_B_scaffold_206_22

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 21473..22762

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CID3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 424.0
  • Bit_score: 695
  • Evalue 2.10e-197
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:EYR83125.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 424.0
  • Bit_score: 695
  • Evalue 2.90e-197
ABC-type branched-chain amino acid transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 419.0
  • Bit_score: 503
  • Evalue 3.30e-140

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGACAGCTCGAAATGGAAGCATGCCGGGACTCAACCGCCGGGCGTTCCTGGCGGCCGCCACGACGGCGCTCGCCGCGCCGGTCGTCCTGCGCCATTCGCGCGCCTATGCGCAGACGCCGACGCTGAAGATCGGCCATGTCAGCCCGCGCACCGGGCCGCTGGCCGGCTTCGCCGAGGCCGACGACTACATCCTCGATGGCGTCGCCAGGGCTTACGGCAAGGGCATCGAGAACAACGGCAAGAGCTGGGCCGTCGAGATCATCTCGAAGGACAGCCAGTCGAACCCCAACCGTGCCGCCGAAGTCGCCTCCGAGCTGATCCTCAAGGACGAGGTCGACATCATCGTCGCCGCCTCGACGCCGGACACGGTCAATCCCGTCTCCGACCAGGCCGAGGTCAACGGCACGCCCTGCGTCACTACCGACTGCCCGTGGCAGCCCTATTTCTTCGGCCGCAACGGCGCGCCCGACACCGGCTTCCAGTCCACCTACCATTTCTTCTGGGGCCTGGAGGACGTCATCGCCTCGTTCCTCGCCATGTGGAACCATGACGGCGTGGCGAAGAAGGTCGGCGGCCTGTTCCCCAACGACGCCGACGGAAATGCCTGGGGCGATGCCGAGCGCGGCTTCCCCAAGCCGCTCGCGGAAGCCGGCTTCGCGCTCACCGATCCCGGCCGCTACCAGCCGCTGACCGACAATTTCACCGCGCAGATCTCCGCCTTCAAGGGCGCCGGCGCCGAGATCGTCACCGGCAACATGATCCCGCCGGACTTCGCCACCTTCTGGAGCCAGGCCGGCCAGCAGGGTTTTCGGCCGAAGATCGTCACCATCGGCAAGGCGCTGCTGTTCCCCTCCGTCATCGCCTCGCTCGGCGATCGCGGCGTCGGCCTCTCCTCCGAGATCTGGTGGACGCCGGACCATCCGTTCAAGTCGAGCCTGACCGGCGACAGCGCGCGCCAGCTCGCGGAAGGCTATTCGGCCGCCACCGGCCGCCCGTGGACGCAGCCGATCGGCTTCAAGCACGCGCTGTTCGAGGTGGTCGCCGACGTGGTGAAGCGCAGCGGCGACCTGGAGGACCCCGAGGCGATCGTCGCGGCGATCCGCGCCACCTCGCTGCCCACCATCGTCGGCCCGGTCGACTGGTCGAAGGGCCCGGTGAAGAACGTCACCAAGACGCCGCTCGTCGCCGGCCAGTGGCAGAAGCGCGGCGGCAAGGTCGAGCTGGTCGTCACCACCAACGCCAACGCGCCGGAGATCCCGGTCGGCGGCGACCTCGTCCTGCTGTCGTGA
PROTEIN sequence
Length: 430
MTARNGSMPGLNRRAFLAAATTALAAPVVLRHSRAYAQTPTLKIGHVSPRTGPLAGFAEADDYILDGVARAYGKGIENNGKSWAVEIISKDSQSNPNRAAEVASELILKDEVDIIVAASTPDTVNPVSDQAEVNGTPCVTTDCPWQPYFFGRNGAPDTGFQSTYHFFWGLEDVIASFLAMWNHDGVAKKVGGLFPNDADGNAWGDAERGFPKPLAEAGFALTDPGRYQPLTDNFTAQISAFKGAGAEIVTGNMIPPDFATFWSQAGQQGFRPKIVTIGKALLFPSVIASLGDRGVGLSSEIWWTPDHPFKSSLTGDSARQLAEGYSAATGRPWTQPIGFKHALFEVVADVVKRSGDLEDPEAIVAAIRATSLPTIVGPVDWSKGPVKNVTKTPLVAGQWQKRGGKVELVVTTNANAPEIPVGGDLVLLS*