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SCN18_10_11_15_R4_B_scaffold_432_17

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(12018..12872)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLW4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 283.0
  • Bit_score: 439
  • Evalue 2.30e-120
Transcriptional regulator {ECO:0000313|EMBL:AKH98811.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 283.0
  • Bit_score: 454
  • Evalue 9.80e-125
LysR family transcriptional regulator HdfR similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 284.0
  • Bit_score: 301
  • Evalue 1.60e-79

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGATATCGACCGGGCCCGGACGTTCCTCGAGATCGTCCACACGGGCAGCTTCCTGAAGGCGGCCGACCGGCTGCGCGTCACCCAGACCACCGTCAGCGCGCGCATCCGCACGCTCGAGGACGAGCTCGGCCGGCGGCTGTTCGTGCGCAACCGCAACGGCGCGGTGCTGACGGCGGCCGGCCGCGAGTTCGAGCGCTTCGCGCAGTCCTTCGTGCGGCTGTGGGAACGCGCACGCCAGCAACTCACCATTCCGGCCGGCCGCACCAGCGTGGTGGCCGTCGGCGGCGAGCTCAACCTGTGGACCCCGTTGATGCTCGACTGGCTGGTATGGATGAAGGCGCAATGTCCGCAAATCGCCATCCACGCGCATGTCGGCGTGCCCGACCAGCTCCTGGAGCAATTGCGCACCGGCGTGCTCGACCTCGCCATCCTCTATGCGCCGAAGCTTCTGCCCGGTTTTCGGGTGGAACTGATCGAGGAGGAGCAGCTCGTGCTGGTGAGGGCCGCCAGCGGCGAGGGCGTGGCCGGGGGCGAGACGGACGGCCGCAGCTACGTGCATGTCGACTGGGGGCCGCAATTCGCGGCCGAGCGCGGCTTCGGGCCGGCGGCCTTCGGCGAGCCGGGGCTGCTGGTCGGGCTCGGGCCGCTCGGCCTGAGCTACATCCTGCGTGTCGGCGGCATGGGCTATTTCCGCCGCGGCGCGGTGGCGCCGCATCTTGAGGCGGGCGAGCTGGAGCTGGTCGAGGGCGCGCCGGAATTCACCTATCCTGCCTATGCCGTCTATCCCGAGCCGACCGACGGGCGGGAGGACATACAGGAAGCGCTGCGCGGCCTGAAGGCCGTGGCGCGCTGA
PROTEIN sequence
Length: 285
MDIDRARTFLEIVHTGSFLKAADRLRVTQTTVSARIRTLEDELGRRLFVRNRNGAVLTAAGREFERFAQSFVRLWERARQQLTIPAGRTSVVAVGGELNLWTPLMLDWLVWMKAQCPQIAIHAHVGVPDQLLEQLRTGVLDLAILYAPKLLPGFRVELIEEEQLVLVRAASGEGVAGGETDGRSYVHVDWGPQFAAERGFGPAAFGEPGLLVGLGPLGLSYILRVGGMGYFRRGAVAPHLEAGELELVEGAPEFTYPAYAVYPEPTDGREDIQEALRGLKAVAR*