ggKbase home page

SCN18_10_11_15_R4_B_scaffold_501_22

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(19496..21298)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide biosynthesis protein GtrA n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMU7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 585.0
  • Bit_score: 535
  • Evalue 5.00e-149
Polysaccharide biosynthesis protein GtrA {ECO:0000313|EMBL:ESX80424.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 585.0
  • Bit_score: 535
  • Evalue 7.10e-149
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 593.0
  • Bit_score: 520
  • Evalue 6.20e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1803
ATGGCGCGGCAGATCGGCGAAGCCGAGACCACGGCGCCGCGCAGGCCAGCGGGCGACGCGCTGCTGGCGCTGCTGGCCACGCTCGCCTCGGTCGGCGCCTCGGCGGTCGCCGGCTTCCCCAAGCTCGCCTTCCCCGGCAGCGACAATGACAGCCTGATGCGGCTGGCGCAGGTGCGCGACCTGCTGGCCGGGCAGGGCTGGTTCGACCTCCACCAGTACCGGATGGGGCTGGAGGGCGGCTTCGTCATGCACTGGTCGCGGCTGGTCGACGCGCCGGTGGCCGGGCTGATCCTGCTGCTGCGGCCCTTCATCGGCGAGGGACGGGCCGAGCTCGCCGCGCAGTTCGCCTGGCCGGCGCTGACCATGGCGGCCGCACTGTGGTTCATCCTGCGCGCGGCACGGCTGCTCGGCGGCGAGGCGGCGCGGTTTCCGGCGCTGGTGCTGGGCGCGACGGGGCTACATTTCCTCTACATCTTCGCGCCGGGCTCGCTCGACCACCACAACATCCAGCTCGCGCTGATCCTCGCCGTCTGCGCGCTGCTCCTGTCCGGCGGCTTCGTCGCCGGCCTCGGCGCGGGTGCCGCGGCCGCCGCGAGCCTCGCCATCGGCATGGAGACGCTGCCTTATGTCGCCGCGGCCGGCGCGGTCGTGGCGCTGCTGTTCTGGCTGCGCGGCGCCGGCGAGGCGCCGACCGCGACCGGCTTCGGGGCCGGGCTGGCGGCCGCATCGGCCGTGCTGTTGCTCGCCACGGTGCGGCCGTCGCAATGGACGGTCGCAGCCTGCGACGCATTCTCCGGCGCGCAGGCGGGACAGGCGCTGCTCGGCGGGCTGGAGCTCGCCGTCATCGCCTGCGCCTGGCGCGAGGCCGGCAGGGCCCGGCGGCTCGCCGCGCTCGCCGGGCTGGCGGTGGTCAGCGCGGCCTGGCTGCTGATCGCCTATCCGCAATGCCTCGCAGACCCCTATGCCGCGCTCGACGGGCGGCTGAAGACGCTGTGGCTCGACCGGGTGAGCGAGGCGCAGCCGCTGTGGCGGCTGGTCGCCGAGGACCCGGCTGCCGTCGCGCTCTACTACGTCACGCCGGCGCTGGGCCTCGCATTCGCGGCCATCCGGCTGGCGCGGCGCGGCTTCGACCGGGGCATGCTCGTCGCCGGCCTGCTGCTCGCCACCGCCTTCGCCGTCTCGGCCTGGCAGGTACGCGGCGCGAGCTTCGCGATCGCGCTGGCCATCCTGCCGCTGGCGGCCTGGGTCGGGGAGATCCGCGCGCGCCAGGCGGAACGGCCGTCGAACGCCGGCAGCCTGCGGCTCGTCGGCGCCTGGCTCGTCAGCTTCAACGTCGTGTGGGGGCTGGCGGCGGCGCAGCTCGCCGGACCCGCCGGCGGCATCGCGCCGCAGGTCGCCGGCGCCGACCGCTGCGAGGCGGCCGCCGCCTATGGCGGGCTTGCCGCGCTGCCCGCCGGCACGGTGGCGGCGGTCTCCAACCTCGGCGCGCCGATCCTGGCGCTGACGCCCCACCGGGCGCTCGCCGGTCCCTACCACCGCAACATCGCCGGCAATACCGCCGTGCTCGACATGATGACGGCCGATCCCGCCGCCGCGCGCGATCTCGCGGCCCGCTACGGCGTCGACTACATAGCCGTCTGCGCCGGCAACCCGGAAAGCGCCTTCCTCGCCGGGCAGGCGCCGGCGGGCCTGCTGGCCCGGCTCACCGCAAGCCAGGCACCGGGCTGGCTGGAGCCGGCCGGCCAGTCCGGGGACGGGTCCATGGCAATCTACCGCGTGGCGGGCGCAGATGTTCGCAGTTGA
PROTEIN sequence
Length: 601
MARQIGEAETTAPRRPAGDALLALLATLASVGASAVAGFPKLAFPGSDNDSLMRLAQVRDLLAGQGWFDLHQYRMGLEGGFVMHWSRLVDAPVAGLILLLRPFIGEGRAELAAQFAWPALTMAAALWFILRAARLLGGEAARFPALVLGATGLHFLYIFAPGSLDHHNIQLALILAVCALLLSGGFVAGLGAGAAAAASLAIGMETLPYVAAAGAVVALLFWLRGAGEAPTATGFGAGLAAASAVLLLATVRPSQWTVAACDAFSGAQAGQALLGGLELAVIACAWREAGRARRLAALAGLAVVSAAWLLIAYPQCLADPYAALDGRLKTLWLDRVSEAQPLWRLVAEDPAAVALYYVTPALGLAFAAIRLARRGFDRGMLVAGLLLATAFAVSAWQVRGASFAIALAILPLAAWVGEIRARQAERPSNAGSLRLVGAWLVSFNVVWGLAAAQLAGPAGGIAPQVAGADRCEAAAAYGGLAALPAGTVAAVSNLGAPILALTPHRALAGPYHRNIAGNTAVLDMMTADPAAARDLAARYGVDYIAVCAGNPESAFLAGQAPAGLLARLTASQAPGWLEPAGQSGDGSMAIYRVAGADVRS*