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SCN18_10_11_15_R4_B_scaffold_520_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(81..737)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B786_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 197.0
  • Bit_score: 319
  • Evalue 2.10e-84
TetR family transcriptional regulator {ECO:0000313|EMBL:KFE35054.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 380
  • Evalue 8.10e-103
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 197.0
  • Bit_score: 319
  • Evalue 5.80e-85

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GTGCGCAAGTCAGCAAAACTCCGCAAGGCCGAGATCGTGGCCACCGTGCTCGATCTGACCGACCGGATCGGGCCGGACCGGGTGACGACAGGCGCCGTCGCGTCGCAGATCGGCGTCACGCAGGCGGCGCTGTTTCGGCATTTTCCGACCAAGGCGGCGCTGTGGCAGGCCGTGGCCGAGCATGTCGCCGAGCGGATGACAACGGCCTGGGACGAAGCTCTCAACCTCGGCAACGCGCCGGTTATCCGGTTGCGCGCACTGATTGCCGCGCAATTCGCACAGATCGCTGCGACCCCCGCCCTGCCGATGCTGCTGTTCTCACGTGAACTGAACGTCACCAATGCGGAACTGCGCGCCACGTTTCACGGCAGGCTCACGGCCTTTCGTGGCCTGCTTGCGCGGGAGGTCGGCGCCGGGCAGCAGGCGGGCGTGCTTTGGGACGACGTCGCCGCAAACGATGTGGCGGTGCTGCTGACCGCGCTCGTGCAGGGGGTGGCAATCCGCTGGGCGCTCGGCGCGCGCGATTTCAACCTTCGCGAGGAGGGATTGCGGCTGTTCGACGTGCAATGCCGGCTTCTGGCTGTGCGAGGATGTGTTTCGGCGTGGAATAAGGACCCCGTTTCAGGGGTGATCGGCATCCAAAAGGGACCCCTGTAA
PROTEIN sequence
Length: 219
VRKSAKLRKAEIVATVLDLTDRIGPDRVTTGAVASQIGVTQAALFRHFPTKAALWQAVAEHVAERMTTAWDEALNLGNAPVIRLRALIAAQFAQIAATPALPMLLFSRELNVTNAELRATFHGRLTAFRGLLAREVGAGQQAGVLWDDVAANDVAVLLTALVQGVAIRWALGARDFNLREEGLRLFDVQCRLLAVRGCVSAWNKDPVSGVIGIQKGPL*