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SCN18_10_11_15_R4_B_scaffold_391_24

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(21724..22218)

Top 3 Functional Annotations

Value Algorithm Source
L-PSP family endoribonuclease n=1 Tax=Rhizobium meliloti RepID=UPI0003629A91 similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 153.0
  • Bit_score: 241
  • Evalue 5.40e-61
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGD96442.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 157.0
  • Bit_score: 241
  • Evalue 5.80e-61
Endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 157.0
  • Bit_score: 238
  • Evalue 9.80e-61

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAACATCGCAGACCACGACGTGCCGGCTGTCGCGTCGCCCCGGGAGCGCCTGGCGCGGCTGGGCATCGTCGTTCCGCCGCCGCCGCCGCCGATCGCCAACTTCCTCACCCATGTGCGGGAAGGCAGCCTGCTGTTCCTGTCGGGGCAGGGGCCGCGCGAGGCGGACGGCACCCTGCACACCGGCAAGGTCGGCATCGACGTCACCGCCGGCGAGGCCTACGCCCATGCCCGCCTGACCGGCATCAACCTGCTGTCGGTCATGCAGGGCGTGCTCGGCGACCTCGGCCGCGTGAAGCGCATCGTCAAGCTGCTCGGCATGGTCAATGCCGCGCCCGACTTCGGCGACCACCCGAGCGTCATCAACGGCTGCTCCGACCTGTTCGTCGAAATATTCGGCGACCGCGGCCACCACGCCCGCTCGGCCGTGGGCCTGTCCTCGCTGCCGGGCAACATCACCGTCGAGATCGAGGCGATCGTGGCGATCGCGGAGTAG
PROTEIN sequence
Length: 165
MNIADHDVPAVASPRERLARLGIVVPPPPPPIANFLTHVREGSLLFLSGQGPREADGTLHTGKVGIDVTAGEAYAHARLTGINLLSVMQGVLGDLGRVKRIVKLLGMVNAAPDFGDHPSVINGCSDLFVEIFGDRGHHARSAVGLSSLPGNITVEIEAIVAIAE*