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SCN18_10_11_15_R4_B_scaffold_391_29

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(26188..27108)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQW0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 306.0
  • Bit_score: 268
  • Evalue 5.90e-69
Peptide ABC transporter permease {ECO:0000313|EMBL:KFL27356.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 303.0
  • Bit_score: 272
  • Evalue 5.70e-70
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 303.0
  • Bit_score: 266
  • Evalue 4.80e-69

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGATCGGGTTCCTGGCCAGACGCTTCGCGACCATCCCGCTGGTGGTGCTGGGCGTCGTCACGATCCTGTTCATCATCTTCAAGTCGGTTCCCGGCGACGAGGCTGCCTTCGTCGCCGGGGCCACGGCCACCCAAAGCGAGATCGAGGCCGTGCGCGTGCAGCTCGGCCTCGACCGGCCGCTGGTCGAGCAATATGCGCGGCATGTCTCGGGGCTGGTGGTCGGCGACTTCGGCTATTCGACCACCTTCCGCGGCAACCCGTTGCCGCACATCATCAGCCGGCTGCCGGCCACGCTGGCGCTGGCGGCGGCCGCGATTGGGCTCACGATCCTCATCGGCATTCCGGCGGGGGTCGTGGCCGCCGCTTACCGCAACCGGCTGCCCGACTACCTGATCTCGCTCTCGGTCGTCGGGCTGCTGGCGATCCCGAACTTCTGGCTGGGCATGCTGCTCATCGCCTGGCTCTCGGTCGATCTCGGCCTGCTGCCGAGCTTCGGCGCCAGCGGCCCTGCCTCGCTCGTCATCCCCACGCTCGCGCTCGCCGCGCGGCTGATCGCGCTCGTTGCCCGCATGACGCGCGGCGTCGTCATCGAGGAACTGCGCAAGGACTACGTGCGGACCGCGCGCGCCAAGGGCCTCTCGAAGGGGCTGGCGCTGCGCCGCCACGTCCTGCGCAACGTGATGATCCCCACCGTCACCGTGATCGGGCTCCAGGCCGGCTATCTGCTCGGCGGCTCGGTGGTGGTGGAACGGCTCTGCGCCTGGCCGGGCATCGGCGACCTGCTGCTGACGGCCGTGTCCGTGCGCGACTACACGCTGGTGCAGGGGATCGTGATGATCTTCGTCGTCTCGTTCCTCGTCATCAACATCGCGGTCGAGGTGCTCTATCGCTTCGTCAATCCGAGGCTGCGCTATGCCTGA
PROTEIN sequence
Length: 307
MIGFLARRFATIPLVVLGVVTILFIIFKSVPGDEAAFVAGATATQSEIEAVRVQLGLDRPLVEQYARHVSGLVVGDFGYSTTFRGNPLPHIISRLPATLALAAAAIGLTILIGIPAGVVAAAYRNRLPDYLISLSVVGLLAIPNFWLGMLLIAWLSVDLGLLPSFGASGPASLVIPTLALAARLIALVARMTRGVVIEELRKDYVRTARAKGLSKGLALRRHVLRNVMIPTVTVIGLQAGYLLGGSVVVERLCAWPGIGDLLLTAVSVRDYTLVQGIVMIFVVSFLVINIAVEVLYRFVNPRLRYA*