ggKbase home page

SCN18_10_11_15_R4_B_scaffold_588_19

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 13596..14858

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 421.0
  • Bit_score: 789
  • Evalue 1.50e-225
Transcription termination factor Rho n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CUQ2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 421.0
  • Bit_score: 789
  • Evalue 1.00e-225
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 421.0
  • Bit_score: 785
  • Evalue 5.50e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCAGGAAATGAAACTACAGGAACTCAAGAGCAAGACTCCGACCGACCTGATCGCGTTCGCCGAGTCGATGGAGGTCGAGAACGCCAGCGTCATGCGCAAGCAGGAGCTGATGTTCGCCATCCTCAAGCGGCTCGCCGCGCAGGACATCGAGATCATCGGTGAAGGCGTGGTCGAGGTCCTGCAGGACGGGTTCGGCTTCCTGCGCTCGGCCAACGCCAACTACCTGCCGGGCCCGGACGACATCTACATCTCTCCCTCCCAGATCCGCCGCTTCTCGCTGAAGACGGGCGACACGGTCGAGGGGCCGATCCGCAGCCCGAAGGAAGGCGAGCGCTATTTCGCGCTGCTCAAGGTCAACACGATCAATTTCGAGGATCCGGAGAAGATCCGGCACAAGATCCATTTCGACAATCTGACGCCGCTCTATCCCGACGAGCGGCTGAAGATGGAGATCGAGACGCCGACCAAGGACCTGTCGGCACGCGTGATCGACCTCGTCGCCCCGCTCGGCAAGGGCCAGCGCGGCCTGATCGTGGCGCCGCCGCGCACCGGCAAGACGGTGCTCCTGCAGAACATCGCCCATTCGATCACCGCCAACCATCCGGAGTGCTTCCTGATCGTGCTGCTCATCGACGAGCGGCCGGAGGAAGTGACCGACATGCAGCGCTCGGTGAAGGGCGAGGTCATCTCGTCGACCTTCGACGAGCCGGCGACCCGCCACGTGCAGGTGGCCGAGATGGTCATCGAGAAGGCCAAGCGTCTCGTCGAGCACGGTCGCGACGTCGTCATCCTGCTCGATTCGATCACCCGCCTCGGCCGCGCCTACAACACGGTGGTGCCGTCGTCGGGCAAGGTGCTGACCGGCGGCGTCGACGCCAACGCGCTGCAGCGGCCGAAGCGCTTCTTCGGCGCGGCGCGCAACATCGAGGAAGGCGGCTCGCTGACCATCATCGCGACCGCGCTGATCGACACCGGCAGCCGCATGGATGAGGTGATCTTCGAGGAGTTCAAGGGCACGGGCAATTCCGAGATCGTGCTCGACCGCAAGGTGGCGGACAAGCGCATCTTCCCGGCCATGGATATCCTCAAGTCCGGCACGCGCAAGGAAGACCTGCTGGTGCCACGGCAGGACCTGCAGAAGATCTTCGTGCTGCGGCGCATCCTGGCGCCGATGGGCACGACCGACGCGATCGAGTTCCTCATCGACAAGCTGAAGCAGACGAAGACGAACGGCGATTTCTTTGATTCGATGAACACCTGA
PROTEIN sequence
Length: 421
MQEMKLQELKSKTPTDLIAFAESMEVENASVMRKQELMFAILKRLAAQDIEIIGEGVVEVLQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVNTINFEDPEKIRHKIHFDNLTPLYPDERLKMEIETPTKDLSARVIDLVAPLGKGQRGLIVAPPRTGKTVLLQNIAHSITANHPECFLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAMDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNGDFFDSMNT*