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SCN18_10_11_15_R4_B_scaffold_408_18

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(17741..18655)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, LysR family protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A9E9_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 301.0
  • Bit_score: 236
  • Evalue 2.40e-59
Putative transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EMS94953.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 301.0
  • Bit_score: 236
  • Evalue 3.40e-59
putative transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 302.0
  • Bit_score: 213
  • Evalue 4.80e-53

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCGAAGGCCGCTGCGTTTCCGTCAGATCGAGGCGCTGCGCGCATTGGTCGAAGAGGGGTCGGTCACCAAGGCCGCCGAGCGGCTGTTCGTGTCGCAACCGGCCGTCAGCAAGCTGCTGGCCCATCTCGAGGAGGATTGCGGTTTCGCGATCCTCGAGCGCACGCATGGGCGTCTTTCGCTGACGCCGGCCGGATACCGCGTCTACGACGAGATAGACCGCGTGTTCCGCGGCGTGAACCAGCTCCAGGAGGCCGTCGATTCGATCCGCCGGGAAGAGGAAGGCCGGCTGATCGTGGCCGCATCGCCGGTGCTGGCCGACCTGATCGTGCCCAAGGCCATCATCTCGCTGATCGGCATGAACCCCGGCTTCCAGGTGACGCTGCTGTCGGGAAAATCGCAGGACGTGATCGACAAGGTCAGGATGAAGGAAGTGGACGTCGGCGTCATCTTCCCCAATTACGACGTGTCGAACGCCTATGTGCGCACGGACCGCATCGTCGCCTTCGATCTCGTCTGCATCATGCCGGTCGGCCACCGGCTGACGCGGGAGAAGGTGGTCACCACCGCGCATCTGAGAGGCGAGAAGTTCATCTCGTCGCCGCCCAACAGCCAGATGCGGCGCCTGATCCAGAACGCGGCCGAAAAGGCCGAGATCGAGCTCGACTTCGTGATCGAGACGAGCACGGCGACGTCGATCGCCGACTTCGTCGCCGCCGGCCTCGGCATCTCGCTCGTGCACCCCATATTCACGCGCCCCAAGAGCGGGGCCGTCGAGGTGCGCCCCTTCGAGCCCGCGATCAGCACCCACCTGCTGAGCTGCATCCCGCGCGAGCCGCGCAATTCGACGATGGTGAGCGCCTTCATCGAGCAGATGAAGATCGTCACCCCGAAGATCGTCGGGCAGATCGGCTGA
PROTEIN sequence
Length: 305
MRRPLRFRQIEALRALVEEGSVTKAAERLFVSQPAVSKLLAHLEEDCGFAILERTHGRLSLTPAGYRVYDEIDRVFRGVNQLQEAVDSIRREEEGRLIVAASPVLADLIVPKAIISLIGMNPGFQVTLLSGKSQDVIDKVRMKEVDVGVIFPNYDVSNAYVRTDRIVAFDLVCIMPVGHRLTREKVVTTAHLRGEKFISSPPNSQMRRLIQNAAEKAEIELDFVIETSTATSIADFVAAGLGISLVHPIFTRPKSGAVEVRPFEPAISTHLLSCIPREPRNSTMVSAFIEQMKIVTPKIVGQIG*