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SCN18_10_11_15_R4_B_scaffold_408_30

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(30712..31251)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF85E4 related cluster n=1 Tax=unknown RepID=UPI0003CF85E4 similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 249
  • Evalue 1.60e-63
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 249
  • Evalue 6.10e-64
RNA polymerase sigma factor {ECO:0000313|EMBL:ESY75209.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 249
  • Evalue 2.30e-63

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGCGAGGGCGAGGAGGCCGAACTGGCGGCTTTCCTGCGTGCCGCCATCGGTGGTGACGAGAAGGCCTATGCGGCGTTCCTGACGCGCGTGGCAGCGAGGGTCCGCATCTTCGCGCGGCGCAGGATCACGCAGGGCGGCGTGGACCCCGAGGATGTCGTGCAGGAAACCTTGCTGGCCATACACACCAAGCGGCATACGTGGATCGCCGACGCGCCGGTGCTTCCGTGGGTGAACGCCATCGCCCGCCACAAGCTCGTCGACGCCTTCCGGCGCCAGGGCCGGCGGATGGAGGTCGATCTCGACGACCACGCCGACAACCTCCCGCAGCCGGAGGCCGAGACGGTGACGAGCCGCGACGTCGGCCGCGCGCTGGATGCGCTTACGCCGGGCCAGCGGGCCGTGGTCTCGGCCATATCGGTCGAGGGCCGTTCCATCGCGGAGACGGCCGTCAGGCTCAGCATGAACGAGACCGCGGTGCGCGTGGCGCTGCATCGGGGTCTCAAGGCGATCGCCAGCCGGTTCGGACGGACGGCATGA
PROTEIN sequence
Length: 180
MSEGEEAELAAFLRAAIGGDEKAYAAFLTRVAARVRIFARRRITQGGVDPEDVVQETLLAIHTKRHTWIADAPVLPWVNAIARHKLVDAFRRQGRRMEVDLDDHADNLPQPEAETVTSRDVGRALDALTPGQRAVVSAISVEGRSIAETAVRLSMNETAVRVALHRGLKAIASRFGRTA*