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SCN18_10_11_15_R4_B_scaffold_548_26

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(29584..30213)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J0K9S4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 178.0
  • Bit_score: 114
  • Evalue 9.60e-23
Response regulator PleD {ECO:0000313|EMBL:ELT49448.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 162.0
  • Bit_score: 114
  • Evalue 1.40e-22
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 201.0
  • Bit_score: 111
  • Evalue 2.30e-22

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGTCATGCCCATCGTTCCCCCCGCCGCGGTCGCAGCGCTCTGCGCGGCCCTGCTCGTCGGCCGGCGCTGGGTCGGGCATGTGCAGATGTCGCGGCGCAAGGCGCTGGAAGACCAGCTCACCGGCCTGATGAACGGCCGCGCCTTCGCCAAGCGCGTCGACGACGGCCTCGACGCCATCCCCGACAGGTCGGGCGAGATGAGCCTGCTGATGTTCGACATCGACGGGCTGGACGCCATCAACGACCGCTTCGGCCGCGAGTTCGGCGATTTCATCCTGCGCCTGTTCGCCGCCAAGGCGCGCGCCGAGATCCGCGAGGACGACCTCCTGTTCCGGCTCGGCGACGACGAGTTCTGCTCGATCCTGCCGCACACCTCCGAGGAGGACGCCGCCGCGATCGCGGAGCGCATCAGGGCCGCCTTCTCCGAGAAGCCGCTGCGCGCCCGCAAGAAGGAGAACGTCAGGCCGACGGTGACCGTCGGGCTCGCCTCCTCCCGCCTCGTCGGCTTCGGCATCGACAGGCTGAAGGCCGCGGCGGACGCCGCCCTTGCCGACGCCAAGCATGCCGGCGGCAACGGCCTCGTGCTCTATCGCGACGACGCCCCGGCGGCCTGTCCCGTCGCGGCCTGA
PROTEIN sequence
Length: 210
MVMPIVPPAAVAALCAALLVGRRWVGHVQMSRRKALEDQLTGLMNGRAFAKRVDDGLDAIPDRSGEMSLLMFDIDGLDAINDRFGREFGDFILRLFAAKARAEIREDDLLFRLGDDEFCSILPHTSEEDAAAIAERIRAAFSEKPLRARKKENVRPTVTVGLASSRLVGFGIDRLKAAADAALADAKHAGGNGLVLYRDDAPAACPVAA*