ggKbase home page

SCN18_10_11_15_R4_B_scaffold_557_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(231..554)

Top 3 Functional Annotations

Value Algorithm Source
ISPsy20, transposase IstB, transcriptional regulator, LysR family-fusion n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2Y7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 103.0
  • Bit_score: 146
  • Evalue 1.20e-32
ISPsy20, transposase IstB, transcriptional regulator, LysR family-fusion {ECO:0000313|EMBL:EAQ33401.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 103.0
  • Bit_score: 146
  • Evalue 1.60e-32
putative integrase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 102.0
  • Bit_score: 123
  • Evalue 2.30e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
TTGCCGGATCGGCCCAGCAAGCTTGATGCCTATGCCGAGCGTCTGTCGGTCTGGCTGCGGACCGAGGCGAACAAGCCGCGCAAGCAGCAGTGGCCGATCAAGCAGTTGCATTCGGACCTGATGAGCCTCGGCTATGAAGGCTCTTACGGGCGCGTTACGGCCTTTGCGCGCCTGGAAGGCAGATCGCCAGCGTCAGATGCAACGAGCAGGCCCGGCACCTTCGTGCCGTTGGTGTTCGAGCTCGGCGAGGCGTTCCAATTCGACTGCTCAGAAGGCTGGCCAGTTCTCGGCGGCGAGCGCTCGCACCGGACCTCGCAACTGTGA
PROTEIN sequence
Length: 108
LPDRPSKLDAYAERLSVWLRTEANKPRKQQWPIKQLHSDLMSLGYEGSYGRVTAFARLEGRSPASDATSRPGTFVPLVFELGEAFQFDCSEGWPVLGGERSHRTSQL*