ggKbase home page

SCN18_10_11_15_R4_B_scaffold_557_17

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(12679..15648)

Top 3 Functional Annotations

Value Algorithm Source
TnpA, transposase n=2 Tax=Bacteria RepID=E8PS46_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 989.0
  • Bit_score: 1523
  • Evalue 0.0
Sphingomonas taxi strain 30a NODE_93, whole genome shotgun sequence {ECO:0000313|EMBL:KIU25823.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 989.0
  • Bit_score: 1551
  • Evalue 0.0
transposase similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 982.0
  • Bit_score: 857
  • Evalue 2.70e-246

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → Mobile_element

Sequences

DNA sequence
Length: 2970
ATGGCATTTCTGGACGCGCAGACGCGTACCGTGCTGTTCGAACCGCCTGAGGCGCACGAGGATGCCCAGTCCCGCTACGCGCTCACGCCTGAAGACATCACCTTTGCCAAAGACCATCGCCGGTCTCACAACCGGCTGGGGTTCGCGGTCCAGCTTGCTCTGGTGCGTGACCTTGGACGACCTCTTCGCGCAGAGGAAACACTGCCTCAAGCGGTTGTCGCCATTGTCGCGGACCAGCTCGGGATCGACCCTACGGTCTTCGACCTCTACGCGCGGCGCGAGGAGACGCGGCGGGAGCATGCGCGAGAAATTGTCGCCGAACTCGGGCTGCGTCCTGTGCGGGCAGGCGATTATCGTCTCCTCATCACTGCCGCTGCAGATACTGCGGCAGCCACGGAGAAAGGTGGCCCGATTGTTCAGGCGATCATCGAGAAACTCAAGGACGAGGGCATTCTCGTTCCCGGCGCCGACCTCCTCGAGCGCCTCGCTCTGGCAGGTCGGGCGTCCGCGCGCAGGCACGCATATCGGGATCTGATCCAGGGGCTGGGCAAGGTATCCTTCGATGCGCTCGAGCAACTGGTCGTCGATCGCGCCGGCGACCGCACGATGCTTGGCTGGATCGCGGAAGCGCCGGAAGGGGCGAAGCTGAAGAACTTGAAGGCTGCGATCGCGCGGCTGGAAGTGTTGCGCGGCGCCGGCATCGCCGATGAACGGCGCAAGAGCATCCATGCCAACCGCTATGGTATCATCGCGAAGGAGGCGCGGATCCTCCATGCCCGCGAAATGCTGCGCCTTTCGACCGAGCGCCGGCACGCCACGCTGACCGCGTTCGTGATCGAGCGACAGGCCGCGATCACCGATCTTGCGATCGACATGTTCGGCAAGCTCATTGGCAGCGCCCGGCGCAAGGCCGAGATCAGCCGCAAGGAGCGGCTTCTGAAGGAGGCCCAGATCCTCACCGGCGTTGCGGTCAGTCACATGCAGCTCGGGCAAGCGCTGATGAAGGCGCGTGAGACCGGCGCCGATCTGTCGGCCGCGATTGCCGGCACCATCGGCTGGGATGGGCTCGCGGCCAGCGTCGCGATCGCGGCCGAAGTGGTCCGGCCCGACCGGAGCGACGACCTGGATGAGTTGGTCGACCGGCAGAAGTCGCTCCGCAAAGTAGCGAAGCTCGTCTTCGAAGCTTTCCGTTTCCAGTCCTTCCGGCCCAACGATCCTATTCTCGCCTCGGTCAATCTGCTGCGCGCGCTCCACCGAGGACGTCCGCTGCCCCAGCAACTGCCGCTCGCCTTCCTTACCCGCAAATGGCGGCGCCGTGTCCGCGAGCGCAACAGCAGCGTCGATATCCGCGCCTGGGAGGTAGCGGTTCTCGTCCACCTGCGCGACCGGCTGCGGGCCGGCGATATCTGGGTCGAGGGGAGCCGCGCCTGGCGGAGCTTCGAGGACTATCTCCTGCCGCGTACCACCTTCGCACTAATGCGCGACGAGCAGCGCCTTGGCCTGGCCGTGCCGGACAGTTTCGCTGCCTGGCGTGCCGAGCGTGTCGCCACTCTCGATGCGAAACTGAAGGCGCTCGCCACAGCGGCTGGCGCCAACCAAATCCCCGACGCCAGCATCACGGACAAGGGGCTGTCGGTGTCGCCGATCCGTGAGGAAGAACGGGGCCGGGTCATTGCGCTCAGCCGGCGCCTCTACACTCTCGTCCCGCGCGTGCGGATCACGAGCTTGCTGGCCGAGATCCACAGCTGGACCGGATTCCTCGACAGTTTCACCCATTACCGGACCGGTGCCGGCGCCGGCGACGAGGCCGCGCTGATGGCCGCCATCCTTGCCGACGCCACCAACGCCGGCGCCGAGCGCATGGCCGAGAGTTCGCGTGGCGTCACCATCCACCAGATGATGCTGATGATCGATCGGCATCTTCGGCCCGAAACCTACGCTGCGGCGACAGCCGTGCTGGTCGATGCCCAACAGGCCCATCCCTTTGCCGCGATCTGGGGGGACGGCCACGTCTCCTCCTCGGACGGCCAGTTCTTCCCTGCCGGCGGACGTGGCGAGGCCAGCCTCGATTACAACGCCAAATACGGCACCAGGCCCGGCGCCTCGCTCTACGGCTTCCTCTCCAACCGCTTCGCCTCTTTCTTCTCGCGCCTGATCCAGGCCTCGGAAAGTGAGGCGCCCTATGTGCTCGACGGGCTTCTCCACAACGAAAGCTCGGTCGAGATCCACGAACATGCGACCGACACTGCGGGCGCTACCGAGACGGTCTTCGCCATGTTCCATCTGTTCGGCTACCGCCTCATCCCGCGCATTCGCAATCTAGGCAGCCGAAGGCTGTTCGTGATCGACCCCAAGGCAGACTATGCCTCGCTCGGTTCGCTGATCGGGGGCACCATCAATATGGCGGGCATCGAACAGCATTGGGATGAGGTGCTGCGTCTGGCCGCCTCGATCGGTTCCGGCCTCGTCCCCCCATCCGTGATCCTCAAGAAGATCGCCGCATCGCCCCGCCAGAACAGGCTGGCGCAAGCGCTGCGCGAGATCGGGCGGATCGAGCGCTCGATCTTCATCTGCGACTGGCTGCTCGACCCGAAGCTGCGACGCCGCTCGCATGCCATCCTCAACAAGGGAGAAAGTCGCCACGCCCTCGCGCGCGCCGTGTTCCTCCACCAGCTTGGCGAATTGCGAAACCGCATCGCTGAGACCGTGACCTATCGCGCCTCCGGCCTCAACCTCGTGATCAATGCGATCATCCTGTGGAACACCGTCTATCTCAGCCGCGCCGTCGGCTTCGTGCGCGGGCAGGATGTCGCCATCCCCGACGATGTCCTCGCCCAGGTCGCGCCGCTCCCCTGGAGCCATATCGCCCTCACCGGCGACTATCTCTGGAACGAGATTGACCGACCCCTCGAACGATTCCGCCCTATCCGCGTCAACCGCTTCAACCCCAGGAACTTCCTCTTCCCTTAG
PROTEIN sequence
Length: 990
MAFLDAQTRTVLFEPPEAHEDAQSRYALTPEDITFAKDHRRSHNRLGFAVQLALVRDLGRPLRAEETLPQAVVAIVADQLGIDPTVFDLYARREETRREHAREIVAELGLRPVRAGDYRLLITAAADTAAATEKGGPIVQAIIEKLKDEGILVPGADLLERLALAGRASARRHAYRDLIQGLGKVSFDALEQLVVDRAGDRTMLGWIAEAPEGAKLKNLKAAIARLEVLRGAGIADERRKSIHANRYGIIAKEARILHAREMLRLSTERRHATLTAFVIERQAAITDLAIDMFGKLIGSARRKAEISRKERLLKEAQILTGVAVSHMQLGQALMKARETGADLSAAIAGTIGWDGLAASVAIAAEVVRPDRSDDLDELVDRQKSLRKVAKLVFEAFRFQSFRPNDPILASVNLLRALHRGRPLPQQLPLAFLTRKWRRRVRERNSSVDIRAWEVAVLVHLRDRLRAGDIWVEGSRAWRSFEDYLLPRTTFALMRDEQRLGLAVPDSFAAWRAERVATLDAKLKALATAAGANQIPDASITDKGLSVSPIREEERGRVIALSRRLYTLVPRVRITSLLAEIHSWTGFLDSFTHYRTGAGAGDEAALMAAILADATNAGAERMAESSRGVTIHQMMLMIDRHLRPETYAAATAVLVDAQQAHPFAAIWGDGHVSSSDGQFFPAGGRGEASLDYNAKYGTRPGASLYGFLSNRFASFFSRLIQASESEAPYVLDGLLHNESSVEIHEHATDTAGATETVFAMFHLFGYRLIPRIRNLGSRRLFVIDPKADYASLGSLIGGTINMAGIEQHWDEVLRLAASIGSGLVPPSVILKKIAASPRQNRLAQALREIGRIERSIFICDWLLDPKLRRRSHAILNKGESRHALARAVFLHQLGELRNRIAETVTYRASGLNLVINAIILWNTVYLSRAVGFVRGQDVAIPDDVLAQVAPLPWSHIALTGDYLWNEIDRPLERFRPIRVNRFNPRNFLFP*