ggKbase home page

SCN18_10_11_15_R4_B_scaffold_614_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 10753..11205

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ97_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 153.0
  • Bit_score: 188
  • Evalue 3.80e-45
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:CDX27049.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 153.0
  • Bit_score: 188
  • Evalue 5.30e-45
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 153.0
  • Bit_score: 181
  • Evalue 1.30e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGAACGCGCGCGATAGCGCACTTCGGCTGGTTGCGGGCGAAGCGGACGGCTACCGCCTCGACGAGCAGGTCGGCTACCTGCTGCGCAAGGCCAACCAGCGCCATCTGGCGATCTTTGCGAAGGCGATCCCCGACCTGACGCCGCCGCAATTCGCCGCGCTCGCCCGGCTGGCCGAGATCGGGCAGGCCTCGCAGAACCAGCTCGGCCAGTCGATCGCCATGGACGCCGCCACCATCAAGGGCGTCATCGACCGGCTGAAGGCGCGCGGCCTCGTGGAGCTGTCGAACCACGGCTCCGACCGCCGCCGCCGCGTCGTCAGCCTCACGGCGGCCGGCCGGGCCACCGTCGAGGCGCTGCTCCCGCTCGGCGGCGCCGTCAGCGACGAGACGCTGGCGCCGCTCAACCCGCGCGAGGCCGCGACCCTGCTGAAGCTGCTGGCGCGGCTGACCTGA
PROTEIN sequence
Length: 151
MNARDSALRLVAGEADGYRLDEQVGYLLRKANQRHLAIFAKAIPDLTPPQFAALARLAEIGQASQNQLGQSIAMDAATIKGVIDRLKARGLVELSNHGSDRRRRVVSLTAAGRATVEALLPLGGAVSDETLAPLNPREAATLLKLLARLT*