ggKbase home page

SCN18_10_11_15_R4_B_scaffold_1010_16

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(14134..15090)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4YN86_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 305.0
  • Bit_score: 164
  • Evalue 1.20e-37
Uncharacterized protein {ECO:0000313|EMBL:KJC55889.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 289.0
  • Bit_score: 224
  • Evalue 1.80e-55
putative LysR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 314.0
  • Bit_score: 159
  • Evalue 1.50e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGCCGAACCGGTATGGTCCGCGCATGGATCTGCGGCTCCTCGAACAGTTCGTCCGGGTCTGCGAGGCGGGCAGCCTGACCCGCGCCGCGGAGAAGCTGGCCTGCACCCAGCCGGCGCTGACGCGCCAGATGCTGCGGCTGGAGCGGCAGTTGAACACGCAGCTTCTCGTCCGCAGCTCGCGCGGCGTCGAGACCACGCAGGCCGGCGCGCGGCTGCTGGAGCACGCCCGGCCGCTGCTCGACCATGTCGGCCGCGTGCAGGCCGAGCTCGACCGCATGAAGCGCGAGCCGGCCGGCGAGGTCTCCGTCTGCCTGCCCACCTCCTTCCACGACGTCGTCACGCTGCCGCTCATCTCCGAGGTGCGCCGCGCCCTGCCGCTGGTCAGGCTGCGCGTGCTGGAGGCGATGGACGCCGAGTTGCGCGAGGCGATCGCCGCCGGTGTCGACATCGGCGTCGTCATGCACGATCCCGAGCGCGCGATCGAAGGTGCGGCGCCGATCCCGCTCGGCGAGGACGCGCTGGTGCTCTACGGCCGCCCCGGCGCCTTCCCGCCCGGCGCCAGCATCGGCTTCGGGCAGCTCCGCGGCCTGCCGCTCATCCTGCCCTCGGGGCGCAACCACCTGCGCGAGAAGCTGGCGCGGCTGGCCGGCCGCCACGGCGTCGCGCTCGACATCGTCATGGAGGTCGACACCGCCGGCCTCATCACCGACCTCGCCCGCCGCGGCGAGGGCTTTTCGGTGACGCCGCGCATGGCGCTGAAGCCGCCCGGCGAGGACGGGCTGGAGCAGTGGCCGATCGCCGGCGCCGGCGTCGCCTGGGCCGCCTATGTCCGCGACACGCGGCGCCGGTCGCCCGCCGTCGCCGCCGTCACCGAGCGTCTCACGAATTTGTGCCGCGCCCGCCTCGCCGCGCCGCCGGCCTCTATCCGCGCCGCCGCCGTCGCCTCCCCGCCCTGA
PROTEIN sequence
Length: 319
MPNRYGPRMDLRLLEQFVRVCEAGSLTRAAEKLACTQPALTRQMLRLERQLNTQLLVRSSRGVETTQAGARLLEHARPLLDHVGRVQAELDRMKREPAGEVSVCLPTSFHDVVTLPLISEVRRALPLVRLRVLEAMDAELREAIAAGVDIGVVMHDPERAIEGAAPIPLGEDALVLYGRPGAFPPGASIGFGQLRGLPLILPSGRNHLREKLARLAGRHGVALDIVMEVDTAGLITDLARRGEGFSVTPRMALKPPGEDGLEQWPIAGAGVAWAAYVRDTRRRSPAVAAVTERLTNLCRARLAAPPASIRAAAVASPP*