ggKbase home page

SCN18_10_11_15_R4_B_scaffold_654_6

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(5402..5962)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F5F56 similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 177.0
  • Bit_score: 292
  • Evalue 1.80e-76
Polysaccharide export protein {ECO:0000313|EMBL:EIM75911.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 186.0
  • Bit_score: 291
  • Evalue 7.20e-76
polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 181.0
  • Bit_score: 290
  • Evalue 2.50e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
GTGACGTTCCCACGTGCCGTGACTGCGTTGGCGCTGGCGCTCATGCTGGCAGGCTGCTCGGGCTACAGGCCCGCGCCGCCGGCTTTCCACGCCGCCCTGCAGCAGCCCTATCTGCTCGATTCGGGCGACAGCGTGCGCGTCACCGTGTTCGAGCAGGAAGGCCTGACCAACAGCTACGCGGTCGACCAGGCCGGCTACGTCTCCTTCCCGCTCGTCGGCGCCGTGCCCGCGCGCGGCCAGACCACCAAGCAGCTCGAGGCGGCGATCGCGGCGAAGCTGCGCAACGGCTACATCCGAGACCCCGACGTCTCGGCCGAGGTCGACCGCTACCGGCCGATCTTCATCATGGGCGAGGTCGGCGCGGCCGGGCAGTATTCCTACGTGCCTGGCATGACGGTGCAGAAGGCGATCGCGGCCGCCGGCGGCTTTTCCGCGCGCGCCCAGCAGCGCGACGTCGACATCACCCGCTCGATCAACGGCAAGGTGATGACCGGGCGCGTGGTCACCTCCGACCCGCTGCTGCCGGGCGACACGGTCTACGTGCGCGAAAGGCTGTTCTGA
PROTEIN sequence
Length: 187
VTFPRAVTALALALMLAGCSGYRPAPPAFHAALQQPYLLDSGDSVRVTVFEQEGLTNSYAVDQAGYVSFPLVGAVPARGQTTKQLEAAIAAKLRNGYIRDPDVSAEVDRYRPIFIMGEVGAAGQYSYVPGMTVQKAIAAAGGFSARAQQRDVDITRSINGKVMTGRVVTSDPLLPGDTVYVRERLF*