ggKbase home page

SCN18_10_11_15_R4_B_scaffold_654_15

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(14038..14298)

Top 3 Functional Annotations

Value Algorithm Source
CopG-like domain-containing protein DNA-binding protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4V5_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 85.0
  • Bit_score: 156
  • Evalue 1.20e-35
CopG family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 85.0
  • Bit_score: 156
  • Evalue 3.40e-36
CopG-like domain-containing protein DNA-binding protein {ECO:0000313|EMBL:AFL50911.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 85.0
  • Bit_score: 156
  • Evalue 1.70e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGGAAACCAAAGTTCTGACGGCGCATGTGCCGCTCCCGCTTGCCGAGAAGGTGGACGAAATGGCGGCGCGTCTCGAACGCTCGCGCGGCTGGATCGTCAAGCAGGCCCTCGCGGCCTGGATCGCACAGGAAGAGGAACGTCGACGACTGACGCTGGAGGCGCTGGCCGACGTCGACGCCGGGCGCGTGGTCGACCACAAGGCCGTGCAGGCGTGGGCCGACAGCCTCGACACCGACGATCCCCTGCCCGTTCCGCATTGA
PROTEIN sequence
Length: 87
METKVLTAHVPLPLAEKVDEMAARLERSRGWIVKQALAAWIAQEEERRRLTLEALADVDAGRVVDHKAVQAWADSLDTDDPLPVPH*