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SCN18_10_11_15_R4_B_scaffold_654_19

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 16177..17058

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003710FF7 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 292.0
  • Bit_score: 334
  • Evalue 8.30e-89
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJC47145.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 292.0
  • Bit_score: 340
  • Evalue 2.10e-90
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 290.0
  • Bit_score: 330
  • Evalue 2.60e-88

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGGCAGCGAAGGATTTTCTGGCCGGGCAGTTCGAGGCGAGCCGGCCGCGCCTGACCTCCGTCGCCTACCGCATGCTGGGCTCCCGCAGCGAGGCGGAGGACGCGGTGCAGGAGGTCTGGCTGCGGCTCCAGCGCGCCGACGCGGATGCGATCGGCAATGTCGGCGGCTGGCTGACCACGGTCGTGGCGCGCCTGTGCCTGGACATGCTGCGCGCCCGCAAGGCGCGCCGCGAGGACTCTTTCGAGGCCATGCAGGAAGACGGGCCGCTCGCCTCGATGGCCGACGCGGGCGCCGGTCCCGAGGACGAGATCGCGATGGCCGACTCGGTCGGCCTCGCCATGCTGACGGTGCTGGAGACGCTGGCGCCGGCCGAGCGCGTCGCCTTCGTGCTGCACGACATGTTCGCCGTGCCGTTCGAGGAAATCGCGCCGGCCATCGGGCGCTCGCAGGATGCCGCGCGCCAGCTCGCCAGCCGCGCACGCCGCCGCGTTCAGGGCGCGCGTCCGGATGGGCATGTGGACGCCGGGCGCCGGCGCGAGATCGTCGACGCCTTCCTCGCCGCCTCGCGCGGCGGCGACCTGACGGCACTGCTCGCGCTGCTCGACCCCGACGTCGTGCTGCGCGGCGACGCCGCCACGCTGCGCCTCGGCACCCCGCCCGAGATCCGCGGCGCGGGGCCGGTGGCGGAATTCTTCAACGGCAGGGCGCAGGCGGCGAGGCCGGCCCTCGTCGACGGCAACATAGACGTAGCCGTGGTTCCCGGCGGCCGGCTGCTGCTGGTGCTGCGGCTGGAGATCGCCGGCGGGCGGATCGCCGCCATCAATGCCGTCGCCGCCCGTGACGACCTCGGTCGGCTCGACGTGGCGCTTCTCGACGGCTGA
PROTEIN sequence
Length: 294
VAAKDFLAGQFEASRPRLTSVAYRMLGSRSEAEDAVQEVWLRLQRADADAIGNVGGWLTTVVARLCLDMLRARKARREDSFEAMQEDGPLASMADAGAGPEDEIAMADSVGLAMLTVLETLAPAERVAFVLHDMFAVPFEEIAPAIGRSQDAARQLASRARRRVQGARPDGHVDAGRRREIVDAFLAASRGGDLTALLALLDPDVVLRGDAATLRLGTPPEIRGAGPVAEFFNGRAQAARPALVDGNIDVAVVPGGRLLLVLRLEIAGGRIAAINAVAARDDLGRLDVALLDG*