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SCN18_10_11_15_R4_B_scaffold_1036_21

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 18600..20135

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003768325 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 487.0
  • Bit_score: 647
  • Evalue 1.00e-182
RNA helicase {ECO:0000313|EMBL:EZQ13828.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 479.0
  • Bit_score: 670
  • Evalue 1.20e-189
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 457.0
  • Bit_score: 623
  • Evalue 3.40e-176

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1536
TTGACCAACGAAAACAACATTGAGCCGACCGGCTTCGCCAATCTCGGCATTTCGGGCGTGCTGCTCAAGGCCACCCACGCCGCCGGCTTTGCCGACCCCAAGCCGATCCAGGTCGAGGCGATCCCGCCGCACCTGGCCGGCCGCGACGTCCTCGGCGTCGCCCAGACCGGCTCGGGCAAGACGGCGGCCTTCGCGCTGCCGATCCTGTCCAAGATCATCGCGCTCGGCTCCAGGCGCAAGCCGCGCACGGCCCGCGCGCTGATCCTGGCGCCGACGCGCGAGCTCGCCGTGCAGATCGAGGAGACCATCCGTCTGCTCGCCCGCGGCGCCCACATCTCGACGGCGCTGGTGCTCGGCGGCGTCTCCCGCAGCAGCCAGGTGAAGAAGGTCCAGCCCGGCGTCGACTTCCTCGTCGCCACCCCCGGCCGCCTGACCGACCTCGTGCGCGAGCGAGACGTCGATCTCTCCGAGACCACATGGCTGGTGCTCGACGAGGCCGACCGCATGCTCGACATGGGCTTCATCAACGACGTGCGCCGGATCGCCAAGGCGACGCATCCGGCGCGCCAGACGGCGCTGTTCTCGGCGACCATGCCGCCGGAGATCGAGGAACTGGCCCGCGGCCTGCTGCGCGATCCCGTCCGCATCGAGGTCGCGCCGCAGGGCACGACGGCGGCCGAGATCGTCCAGTCCGTGGTGATGGCCCGCACCAAGCAGAAGCGCAAGCTTCTGTCCGACATGCTGGCCGACCCGGCCTATGAGCGCGTGATCGTCTTCGCCCGCACCAAGCACGGCGCCGACCGCGTTACCCGCGACCTGGCCCGCGACGGCTTCGAGGCGGCCGTGATTCACGGCAACAAGAGCCAGAACGCCCGCCAGAACGCGCTCAACGGTTTCCGCGAGGGCTCCGTGCGCATCCTGGTGGCGACCGACATCGCCGCGCGCGGCATCGACGTGCCGGGCATCAGCCACGTCATCAATTTCGACCTGCCGGACGAGGCCGAGAGCTACGTCCACCGCATCGGCCGAACCGGCCGCAACGGTGCCTCCGGCATCGCGGTGACGCTGTGCGACCCGACCGAGAACGCCAAGCTGCGCCAGGTCGAGCGGGTGATCCGCATGAAGCTGCCGGTCGCAGCGAGCTATCTCGACCAGCCGGACCCGGCGCCAAAGACCGCCGCCGACCGCCAGATCGCGGCGAACGACGACCGCCGCGACGCCGAGCACGAGCGCCGGCAGGGCAGGGGCGGCAACCGCAACGGCAGGCCGGCCCGGCCGCAGGCCAAGCCGGGGCAGGCCCATGCGAAGCCGGCGCACGCCAAGCCCGCGCAGCCGCATGCGACCCATGCCAAGGCCGACCACGGCCGCGGCGTGCCCTATCGCGAGATGCGCGACAACCAGCAGACGGAAGGGCATGCACGCGGCGGCGAGGCTCCGCGTCCGGCTTCCAAGGCCGGCGAGGGCGCCAAGTCCGGCAACAGGAAACGCTTCCGCGGCAAGCGCCGCGGCTTCGGCGGCGCCACCCGCGCCGCCTGA
PROTEIN sequence
Length: 512
LTNENNIEPTGFANLGISGVLLKATHAAGFADPKPIQVEAIPPHLAGRDVLGVAQTGSGKTAAFALPILSKIIALGSRRKPRTARALILAPTRELAVQIEETIRLLARGAHISTALVLGGVSRSSQVKKVQPGVDFLVATPGRLTDLVRERDVDLSETTWLVLDEADRMLDMGFINDVRRIAKATHPARQTALFSATMPPEIEELARGLLRDPVRIEVAPQGTTAAEIVQSVVMARTKQKRKLLSDMLADPAYERVIVFARTKHGADRVTRDLARDGFEAAVIHGNKSQNARQNALNGFREGSVRILVATDIAARGIDVPGISHVINFDLPDEAESYVHRIGRTGRNGASGIAVTLCDPTENAKLRQVERVIRMKLPVAASYLDQPDPAPKTAADRQIAANDDRRDAEHERRQGRGGNRNGRPARPQAKPGQAHAKPAHAKPAQPHATHAKADHGRGVPYREMRDNQQTEGHARGGEAPRPASKAGEGAKSGNRKRFRGKRRGFGGATRAA*