ggKbase home page

SCN18_10_11_15_R4_B_scaffold_1063_16

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(11821..13521)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CA0_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 569.0
  • Bit_score: 1032
  • Evalue 0.0
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 569.0
  • Bit_score: 1032
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 569.0
  • Bit_score: 1032
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1701
ATGGCAAACTTCAATCCGTCCCGCGACGATTTCGCGAGCATGCTCGACGAGTCCTTCTCCGCCGAACATTCGGCCGAGGGCTCGGTCGTCAAGGGCACCATCACGGCCATCGAGAAGGACATGGCCATCATCGACGTCGGCCTCAAGGTCGAGGGCCGCGTTCCGCTCAAGGAGTTCGGCTCGCGCGCCAAGGAGCTGAAGCCGGGCGACGAGGTCGAGATCTATGTCGACCGCATCGAGAACGCACTTGGTGAGGCCGTCCTGTCGCGCGAGAAGGCTCGCCGCGAGGAGAGCTGGACCAAGCTCGAAGAGAAGTTCAACAAGGGCGAGCGCGTCGAAGGCGTGATCTTCAACCAGGTCAAGGGCGGCTTCACCGTCGACCTCGACGGCGCCGTGGCCTTCCTGCCGCGTTCCCAGGTCGACATCCGCCCGATCCGCGACGTCACGCCGCTGATGCACAACCCGCAGCCCTTCGAGATCCTCAAGATGGATCGCCGCCGCGGCAACATCGTCGTGTCGCGCCGCACGGTTCTGGAAGAGAGCCGCGCCGAGCAGCGCTCGGAGATCGTGCAGAACCTCGAAGAGGGCCAGGTCGTCGAGGGCGTGGTCAAGAACATCACCGACTACGGTGCGTTCGTCGACCTCGGCGGCATCGACGGCCTGCTGCATGTCACCGACATGGCCTGGAGGCGCGTCAACCACCCGACCGAGATCCTGTCGATCGGCCAGACCGTCAAGGTGCAGATCATCCGCATCAACCAGGAAACCCACCGCATCTCGCTCGGCATGAAGCAGCTCGAGAGCGATCCGTGGGAGGGCATCGGCGGCAAGTACCCGATCGGCAAGAAGATCAAGGGCACCGTCACCAACATCACCGACTACGGCGCGTTCGTCGAGCTTGAGCCGGGGATCGAGGGCTTGATCCACGTCTCCGAGATGAGCTGGACGAAGAAGAACGTGCACCCCGGCAAGATCCTCTCCACCACCCAGGAAGTCGAGGTGGTGGTGCTCGAGGTCGACCCGGTCAAGCGCCGCATCTCGCTCGGCCTCAAGCAGACGCTGGAGAACCCGTGGGAGGCCTTCGCCCGCAACCATCCGGTCGGCTCGACCGTCGAGGGCGAGGTCAAGAACAAGACCGAGTTCGGCCTGTTCATCGGCCTCGACGGCGACGTGGACGGCATGGTCCACCTCTCCGACCTCGACTGGAGCCGTCCGGGCGAGCAGGTGATCGAGGAGTTCAACCGCGGCGACGTGGTGAAGGCGCAGGTGCTCGACGTCGACATCGACAAGGAGCGCATCTCGCTCGGCATCAAGCAGCTCGGCCGCGACGCGGTCGGCGAGGCCGCGGCCTCGGGCGAACTGCGCAAGAACGCGGTCGTCACCTGCGAGGTCATGAAGATCACGGATGGCGGTCTTGAGGTCCGCCTCGTCGACCACGACATCGAGACCTTCATTCGCCGCAACGACCTGTCGCGCGACCGCGACGAGCAGCGCCCGGAGCGCTTCGCGATCGGCCAGAAGGTCGACGCGCGCGTCATCTCCTTCGACAAGAAGAGCCGCAAGCTCCAGGTGTCGATCAAGGCGCTGGAGATCGCCGAGGAGAAGGAGGCGGTGGCCCAGTACGGCTCGACCGACTCCGGCGCCTCGCTCGGCGACATCCTGGGCGCCGCGCTGAAGAAGCAGGGCGCGCGCGACGAGTAA
PROTEIN sequence
Length: 567
MANFNPSRDDFASMLDESFSAEHSAEGSVVKGTITAIEKDMAIIDVGLKVEGRVPLKEFGSRAKELKPGDEVEIYVDRIENALGEAVLSREKARREESWTKLEEKFNKGERVEGVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDRRRGNIVVSRRTVLEESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPTEILSIGQTVKVQIIRINQETHRISLGMKQLESDPWEGIGGKYPIGKKIKGTVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNVHPGKILSTTQEVEVVVLEVDPVKRRISLGLKQTLENPWEAFARNHPVGSTVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWSRPGEQVIEEFNRGDVVKAQVLDVDIDKERISLGIKQLGRDAVGEAAASGELRKNAVVTCEVMKITDGGLEVRLVDHDIETFIRRNDLSRDRDEQRPERFAIGQKVDARVISFDKKSRKLQVSIKALEIAEEKEAVAQYGSTDSGASLGDILGAALKKQGARDE*