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SCN18_10_11_15_R4_B_scaffold_1161_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 11267..12352

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=POTA_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 353.0
  • Bit_score: 336
  • Evalue 2.10e-89
Putrescine transport ATP-binding protein PotA {ECO:0000313|EMBL:CDP52049.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 355.0
  • Bit_score: 427
  • Evalue 9.60e-117
spermidine/putrescine ABC transporter ATP-binding subunit similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 353.0
  • Bit_score: 336
  • Evalue 5.80e-90

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGGGCAACATGCCATCCGACGTCGAATTCACCAATGTGAGCAAGGTCTTCGGCACCTTCCTGGCGGTCGACGACATCTCGTTCTCGGTGCCCAAGGGCAGCTTCTTCTCGCTGCTCGGCCCTTCCGGCTGCGGCAAGACGACGACGCTCAGGATGACCAGCGGCTTCGAGTGGCCGGACGCCGGCACGGTCCGCATCGCCGGCCAGGACATGCACAACGTCGCGGCCTATTCGCGCCCCACCAACATGGTGTTCCAGCGCTGGGCGCTGTTTCCGCACATGACGGTGGCGCAGAACGTCGCCTTCGGCCTCGAGGTCGACCGCCGCCCGCGCGAGGAGATCCGCAGGCGCGTCGCCGAGGCGCTCGAGCTGGTCGACCTGCTCTCCTTCGCCGACCGCAAGCCGCGCCAGCTCTCCGGCGGCCAGATGCAGCGCGTGGCGCTCGCCCGCGCGCTGGTCAAGCAGCCCAAGGTGCTGCTGCTCGACGAGCCGCTCGGCGCGCTCGACCTGAAGCTGCGCATGCAGATGCAGCTCGAACTGAAGCGCATCCAGCGCGAGGTCGGCACGACCTTCATGTACGTCACGCACGACCAGGGCGAGGCGATGACGATGTCGGACCAGATCGCGGTGATGAACAAGGGCAAGATCGAGCAGCTCGATACGCCGCAGGCGATCTACGACCGCCCGGCCAGCCGCTTCGTCGCCTCCTTCATCGGCAACACCAACCTGATCCCCGTCGAGGTCGTCGGAACGCCCGGCCCGACGGCCCGCGTCAGGCTCGGCGGGCTGGAATTTTCCGCCGCCACCGGCACCGCGCCGAAGGGCGGCAAGGGCACCGTGTCGCTGCGCTACGAGCGCATCCGCATCGGCGCCGACGCGGCCAGCCGCGACACCCGCACGCGCGCGCTGGTCAAGGACGTCATCTTCTCCGGCTCCGCCATCCTCTACGTCGTCGCCCTCGAAGGCTCCGACGTCGAGCTGACGGTCGAGGCGCCGCACGACGGCACCAGTGCGCCGATCGCCAAAGGCTCTGCGGTCGACATCGGCTGGGACGGCGGCGCGACGACGCTGTTTGCCGATGACTGA
PROTEIN sequence
Length: 362
MGNMPSDVEFTNVSKVFGTFLAVDDISFSVPKGSFFSLLGPSGCGKTTTLRMTSGFEWPDAGTVRIAGQDMHNVAAYSRPTNMVFQRWALFPHMTVAQNVAFGLEVDRRPREEIRRRVAEALELVDLLSFADRKPRQLSGGQMQRVALARALVKQPKVLLLDEPLGALDLKLRMQMQLELKRIQREVGTTFMYVTHDQGEAMTMSDQIAVMNKGKIEQLDTPQAIYDRPASRFVASFIGNTNLIPVEVVGTPGPTARVRLGGLEFSAATGTAPKGGKGTVSLRYERIRIGADAASRDTRTRALVKDVIFSGSAILYVVALEGSDVELTVEAPHDGTSAPIAKGSAVDIGWDGGATTLFADD*