ggKbase home page

SCN18_10_11_15_R4_B_scaffold_1230_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 9499..10797

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase n=1 Tax=Rhodococcus opacus RepID=UPI00029CB044 similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 428.0
  • Bit_score: 364
  • Evalue 1.40e-97
Putative homocitrate synthase AksA similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 428.0
  • Bit_score: 364
  • Evalue 4.10e-98
Putative homocitrate synthase AksA {ECO:0000313|EMBL:AHK29374.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 428.0
  • Bit_score: 364
  • Evalue 2.00e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGAGCCAAGCGTCGAAGCCCTTCCATTCCGAGGAAGCCCGCCGGCGTGCGCTCGTGCCCGGCCGCCACTCCGTCAGCCCCTTCAACTTCCATGACGAGGTGCTGGCCGAGTTCGAGTTCCCCGAGCCGCTGGCGCTGATCGACAGCACGATCCGCAAGGTCATCTACACGGCCGGCGTCAGGACCAGCGTCGCCGACCTGCTCAGGATCGGCGAGATCATCGAGGAGCTCGGCGTCAAGGACGAGAGCCTGAACCTGTGGTGGTGGGGCGCAGACCAGCCCAACGCCGTCGAATGGGACGCCGTGCGCGCTTTCGCCAGGGCCGGCTTCGGCTTCCGCGTGAACGTCTTCACCGACACCCTCGTCGGCAGCGGCGCCGCGCCCTCCACCAAGATGCGCCGCACCGTCGACATGCTGGCCGAGGCCGGTGTCGGCGCGATCAATCCCGGGCTGATCGAGCCGCCGGATGCGGATGCGGCCGCCCGCCAGCGAGACGAGTTCGCCGCGTTCGGCGAATATGCCCGCCAGCAGGGCCTGGAATGGACCCTGACGATCGCCCATTGCGGCCGGCGCGACTTCCTCAAGATGGTCGACGGGATGAACACGGCGATCGAGGCCGGCGCCACGCGGCTCGATCCGATGGATTCGACCAGCACCATGTCGCCCGAGGCGATGAAGCGCTACATGCGCACGCTGCGCTCGATGCTGGTCCGGCCGGTGCCGATCACCATGCACACCCACGACGATTTCGGCATGGCGACGGCGACCACGGTCGCGGCCGTCACCGCCGGCGCCTCGCCCGACGTCGCGCTCAACGGCGTCTCCTACCGCTCGGGCTTCGCCGCCCTGGAGGAGGTCGTGCTGGCGCTCGATGTGCTCTACGGCCTGGACGCCGGGATCCGGCTCGACAGGCTGCAATGGGCGGCCGACAGCCTGGCCCGCATCATGGACATGCCGATCCATCCGCTCAAGCCGGTGATCGGAAGCCACCAGTTCCTGCGCGACAGCCCGAACGACATCGCCAAGCTCCTGAGCACCGACAGGGACACCTTTCCCGCCTTCGGCTGCAGCATCGACCCCGGCCTCGTCGGCAGCAAGCTGCGCTGGGTCTGGGGAGAGCAGAGCACGGAGGAGGTGGTCCGCCAGCTCGCGCTGAGCCTCGGGGTCGCCGTCTCGGGCGCCCAGATCAAGGCCGTTCGCGACGAGCTCGACCGCCGCCGCGACGCGCGGCCGGCCTATCCGAAATGGGTCGAGGCCGACGAGGTCGAGGAGGTGCTGCTCGCCATTGCGGCCGGATGA
PROTEIN sequence
Length: 433
MSQASKPFHSEEARRRALVPGRHSVSPFNFHDEVLAEFEFPEPLALIDSTIRKVIYTAGVRTSVADLLRIGEIIEELGVKDESLNLWWWGADQPNAVEWDAVRAFARAGFGFRVNVFTDTLVGSGAAPSTKMRRTVDMLAEAGVGAINPGLIEPPDADAAARQRDEFAAFGEYARQQGLEWTLTIAHCGRRDFLKMVDGMNTAIEAGATRLDPMDSTSTMSPEAMKRYMRTLRSMLVRPVPITMHTHDDFGMATATTVAAVTAGASPDVALNGVSYRSGFAALEEVVLALDVLYGLDAGIRLDRLQWAADSLARIMDMPIHPLKPVIGSHQFLRDSPNDIAKLLSTDRDTFPAFGCSIDPGLVGSKLRWVWGEQSTEEVVRQLALSLGVAVSGAQIKAVRDELDRRRDARPAYPKWVEADEVEEVLLAIAAG*