ggKbase home page

SCN18_10_11_15_R4_B_scaffold_1235_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(2864..4189)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:EZQ13672.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 432.0
  • Bit_score: 518
  • Evalue 8.60e-144
Polysaccharide biosynthesis protein id=4824969 bin=GWC2_Nitrospirae-rel_56_14 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 33.4
  • Coverage: 428.0
  • Bit_score: 236
  • Evalue 2.70e-59
polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 26.6
  • Coverage: 413.0
  • Bit_score: 163
  • Evalue 1.10e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGAAGAGCCTTGCGGCCTTCCTCAGACAGTCGGGCGACCTGCGCCGGTTCGGCTCGGGCCTGATCTGGTCGACGGTGGGCACGGTCGCGGTGCGGCTCACCCCGCTGCTCACCACGGTGCTGATCTCGCGCGGCTTCGGCATCGAGGTGGTCGGCCAGTTCGCCGTCGCCTACGGCACGCTGGTCTCGGCCGGCATGCTGGCGGCGACTGGCGTCAGCCTGATGGCGATCCGCAACATCGCCGCGCAGGCCGAGCAGGCGCCCGAATTCGCCGGCCGCATCGCGGGGCTGGCGCTGATGCTCGCCGCCGCCTGCGGGCTGATCCTGTCGGGCCTGTTCTACTTCCTCGCCGACGTGATCGCCGCCAAGCTGCTGCGGCAGCCGGAGATGGCGCCCTATCTGGCGCTGATCGCGCCGATCATCCTGCTCAACGCCATGAGCCAGGTGCAGATGTCGATCCTCAGCGGGCTGCAGCAGTTCCGCTCGATCGCGCGGCTCAACATCGTCTACGGCGTCGTGCTGATCCTGGCGGTGCCCGCCGGCCTCTATCTCGGCGGGCTGACCGGCTGCTTCATCGCCATGGCGGGAGCGGCGCTCGGCCTGTGCATCATCGCCTATCCGGCGATGCGTTCGGCGCTCGCCGAGCGCGGCATCACGATCACCTTTGCCGGCGCATTGTCGGAATGGCCGCTGATCACCAATTTCGCCGTGCCGGCGCTGCTCGCCTCGATCGTGTTCGAGCCGGTCAACTGGATCTGCACGGCCATCATCGTGTCGATGCCCGGCGGCCTCAAGGAGGTCGGCGTCTACTACATCGCCATGCAGGTCGAGACGCTGCTGCTGTTCGTGCCGCAGATCGTCGTGCAGGTGGTCATCCCGATGCTGTCCAAGGGTTTCGGCGCACGCGATCGCGGCCGCGTGCTGTCCGTCATCGGCATGAGCGTCGGCACCAATTTCGTCATCGCGCTCGGCTTCGTCGGGGCGATGCTGCTGTTCGGCCACTGGGTACTGATGATCTTCAAGCTCGACGCGGCGCACTGGCCGGTCTTCGCCATCGCGGTGGCCAACGCCGCGATCATGTCGGTGGCGCTGCCGCTCGGGCCGATCCCCGCCTCGTCGGGCTACACCTGGACCGGGCTGACCATCACCGCCGGCTGGGCGGCGACCTTCATCGCCGGCACCTGGCTGATGCGCGAGCAGGGCGCGGAAGGCGCGATGACGGCGCGCATGATCGCCTGGTCGGCGCAGTCGGTGATCTACGTCTTCTTCACCCGCTATGCGGTGCGCAAGGTCTGCGACGACAGGGCGATGGCCGCGGCCGAATAG
PROTEIN sequence
Length: 442
MKSLAAFLRQSGDLRRFGSGLIWSTVGTVAVRLTPLLTTVLISRGFGIEVVGQFAVAYGTLVSAGMLAATGVSLMAIRNIAAQAEQAPEFAGRIAGLALMLAAACGLILSGLFYFLADVIAAKLLRQPEMAPYLALIAPIILLNAMSQVQMSILSGLQQFRSIARLNIVYGVVLILAVPAGLYLGGLTGCFIAMAGAALGLCIIAYPAMRSALAERGITITFAGALSEWPLITNFAVPALLASIVFEPVNWICTAIIVSMPGGLKEVGVYYIAMQVETLLLFVPQIVVQVVIPMLSKGFGARDRGRVLSVIGMSVGTNFVIALGFVGAMLLFGHWVLMIFKLDAAHWPVFAIAVANAAIMSVALPLGPIPASSGYTWTGLTITAGWAATFIAGTWLMREQGAEGAMTARMIAWSAQSVIYVFFTRYAVRKVCDDRAMAAAE*