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SCN18_10_11_15_R4_B_scaffold_1235_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(9379..11331)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003493109 similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 649.0
  • Bit_score: 314
  • Evalue 1.50e-82
Uncharacterized protein {ECO:0000313|EMBL:EZQ13673.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 636.0
  • Bit_score: 451
  • Evalue 1.90e-123
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 650.0
  • Bit_score: 313
  • Evalue 9.50e-83

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1953
ATGGTCACAGCCGAAGAAACGGCTCGCACGCCCGCGCCGCCGACGGCCGGCGCCAGCGTCGACGTGCTCGGCCTGATCGACATGGTCTGGCGCCGCAAATGGCTGATCCTGGCCACCGCGGCGGCCGTGGTGGCGCTGGCGCTCGCCGCGCTCGCCGTGATCGGCCCCCGCTACAAGGCGACGGCGCGCATCCTGATCGACCCGCGCGAGGTGCGCGTGGTGCAGAACGACGTGGTGCAGCAGGGCCTCGGCAACGACCTGCTGCTGATCGAGAGCCAGGTCGAGGTGATCACCTCCGAGACCGTGCTGATGCGCGTGGTGCGGCAGGAAAAGCTCGCCGAGGACGCCGAGTTCGTGAAGCCGGCGGATGGCGGGAAGGCCGCCGCGCGCTCGCCCGAGGAGGTCGCGCTCGAAAGCCTCGCCAAGGCGACCAAGGTGTCGCGCGCGGAAAACACCTACGTCATCGAGATCGCGGTGACGACGAAGGAGCCGGCCAAGTCAGCGCGGCTCGCCAATGCGATCGCGGCCGCCTACACCGACGACCAGCAGGACGCCACCGCGAAGGCGACCCGCACCGTCAGCAACTCGATCGAGGATCGGCTGGCCGAGCTGCAGAAGAAGCTGCGCGAGGACGAGCAGAAGGTCGAGGACTACAAGACCGCCAACAATCTCTCCAGCCCGGACGGCAAGCCGCTGCTGGACAACCGCCTCTCCGACCTGTCGACGCGGCTCGCCGCCGCCGTCGGCCGCACCGCCGAGGCCAAGTCGCGGCTGGAAGTGATCGAGCAGGCGATGAAGCAGCGCGGCGACGTCAGCTCGGTGGTCTCCGACACCGAGAACACGACGATGGTGCAGCTTCGCAACCAGTTGAGCGAGGCGCAGCGCAAGCATGCCGAGCTGAGCCAGACGCTCGGGCCGCGCCATCCGCGCGTCGCGGCCGCGCAGGCCGAGGTCGATCAGGCGCGCGCAGCCATTCGCGGCGAGAGCGAGCGCCTCGTCGCGGCCACGCGCGACGCCTGGCGCGCCGCCAAGGAGACCGAGGACGCCATCGCCGCCAGCCTGCGGGACCTGACCGGCCAGTCCTTCGACATCAACCAGAAACTGATCCAGCTCCGCGAGCTGGAGCGGCAGGCGCAGGCGAGCCGTCTCGTCTACGAGGCCTTCCTGGTGCGCGCCAAGGAGGCTGCCGAGCAGGAGAACCTCGGCACCCGCAACGCCCGTATCATCGCGCCGGCCGCCGTGCCCGACAGCGCCGCCTTCCCGCCGCGCAGCCTGCTGCTGATCGCGGCCTGCGTGTTCGGCCTCGGTCTCGGCCTGTTCAACGCCATCGTCGCCGACCTCATCGCGCGCCACCGGCGCCCCGCCGCGCCGAAGCCGGGCAAGCCGGCAGCGCCGGCGGCGGAAGCGCGGCCGCGCACGCCGCTCGGCGACCCGGCGCAGATCCTGCGCGACCATGTCGTGCTGACGCTCAGCCTGGCCGACGCCGAAGGCGCGCGGACGGCAGGACTGGAGCTTGCCCGCGACGCCGCGCGCGAGGGTCATCCGACCCTGTTCGTCGACCTCGCCGACGGCAGCGGCCGGCCCGGCTTCGCGGAGCTGTCGACGGGCAAGGCGGCGATCGGCGACATACTGACGCGCGACGACGCCTCGGGCGCGCACATCGTGCATGGCGGCGACGCCGAGGGGATGGCGGAGGCGGAGTTCCGCGAGGCCTTCTCGATCTTCCTCGACACCTACGAGCGGGTGGTGGTCAATGCCGGCCTGCTGTCGCAGGCGGCGGGCGCGATGGCGGCCGAGGCAGTCGCCAAGGCCGACCATGCCGTGCTGGTGGTGCCGGGCGACACGCTGTCGGCCGAAGAGGCGGCCGCCTACAAGGAACTCGCCGCCTCGGGCGGCATGGCGGTCTCCGTGCTGTCGCTCGCCGACGAGCCGCAGCAGCGCGCCGCCGCCTGA
PROTEIN sequence
Length: 651
MVTAEETARTPAPPTAGASVDVLGLIDMVWRRKWLILATAAAVVALALAALAVIGPRYKATARILIDPREVRVVQNDVVQQGLGNDLLLIESQVEVITSETVLMRVVRQEKLAEDAEFVKPADGGKAAARSPEEVALESLAKATKVSRAENTYVIEIAVTTKEPAKSARLANAIAAAYTDDQQDATAKATRTVSNSIEDRLAELQKKLREDEQKVEDYKTANNLSSPDGKPLLDNRLSDLSTRLAAAVGRTAEAKSRLEVIEQAMKQRGDVSSVVSDTENTTMVQLRNQLSEAQRKHAELSQTLGPRHPRVAAAQAEVDQARAAIRGESERLVAATRDAWRAAKETEDAIAASLRDLTGQSFDINQKLIQLRELERQAQASRLVYEAFLVRAKEAAEQENLGTRNARIIAPAAVPDSAAFPPRSLLLIAACVFGLGLGLFNAIVADLIARHRRPAAPKPGKPAAPAAEARPRTPLGDPAQILRDHVVLTLSLADAEGARTAGLELARDAAREGHPTLFVDLADGSGRPGFAELSTGKAAIGDILTRDDASGAHIVHGGDAEGMAEAEFREAFSIFLDTYERVVVNAGLLSQAAGAMAAEAVAKADHAVLVVPGDTLSAEEAAAYKELAASGGMAVSVLSLADEPQQRAAA*