ggKbase home page

SCN18_10_11_15_R4_B_scaffold_881_11

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(10453..11463)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 336.0
  • Bit_score: 641
  • Evalue 6.70e-181
DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPU9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 336.0
  • Bit_score: 641
  • Evalue 4.80e-181
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 336.0
  • Bit_score: 638
  • Evalue 6.70e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATCCAGAAAAACTGGCAGGAACTGATCAAGCCCAACAAGATCGAGTTCTCGTCGAAGAAGAAGACGCTGACCACGCTGGTCGCCGAGCCGCTCGAGCGCGGCTTCGGCCTGACGCTGGGCAACGCGCTGCGGCGCGTGCTGCTGTCGTCGCTGCGCGGCGCGGCCGTCACCGCCGTCCAGATCGACGGCGTGCTGCACGAGTTCTCCTCGATCGCCGGCGTGCGCGAGGACGTCACCGACATCGTGCTCAACATCAAGGAAATCGCCATCAAAATGGAAGGCGACGGCCCCAAGCGCATGGTCGTGCGCAAGTCGGGTCCGGGCGCCGTCGTCGCCGGCGACATCCAGACCGTGGGCGACGTCGAGATCCTCAACCCCGACCACGTGATCTGCACGCTGGACGAGGGTGCGGAGATCCGCATGGAGTTCACCGTCAACACCGGCAAGGGCTACGTTCCGGCCGAGCGCAACCGCGCCGAGGACGCCCCGATCGGCCTGATCCCGGTCGACAGCCTCTATTCGCCGGTCAAGAAGGTCTCCTACAAGGTCGAGAACACCCGAGAGGGCCAGGTTCTCGACTACGACAAGCTGACCATGACCATCGAGACCGACGGCTCGATCTCGGGCGAGGACGCCACCGCCTTCGCGGCGCGCATCCTGCAGGACCAGCTCGCGCTCTTCGTCAACTTCGAGGAGCCGCAGAAGGCGGTAGCCGAGGAGCAGGTCACCGAGCTCGCCTTCAATCCGGCGCTGCTCAAGAAGGTGGACGAGCTGGAGCTGTCTGTCCGTTCGGCCAACTGCCTGAAGAACGACAACATCGTCTACATCGGCGACCTGATCCAGAAGACGGAAGCGGAGATGCTCCGCACGCCGAACTTCGGCCGCAAGTCGCTGAACGAGATCAAGGAAGTGCTGGCCTCCATGGGGCTGCATCTCGGCATGGAAGTGCCGGACTGGCCGCCGGAGAACATCGAGGATCTGGCCAAGCGGTACGAGGATCAGTACTAG
PROTEIN sequence
Length: 337
MIQKNWQELIKPNKIEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIAGVREDVTDIVLNIKEIAIKMEGDGPKRMVVRKSGPGAVVAGDIQTVGDVEILNPDHVICTLDEGAEIRMEFTVNTGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMTIETDGSISGEDATAFAARILQDQLALFVNFEEPQKAVAEEQVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMEVPDWPPENIEDLAKRYEDQY*