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SCN18_10_11_15_R4_B_scaffold_2370_14

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(12120..12785)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase, subunit B protein (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 232.0
  • Bit_score: 105
  • Evalue 1.00e-20
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 232.0
  • Bit_score: 105
  • Evalue 5.10e-20
Pseudouridine synthase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MGU9_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 232.0
  • Bit_score: 105
  • Evalue 3.60e-20

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
CGCAGCCGCACCTCCAACGTCTGGATGGCGCCCGGCGCGCGGCCACAGCCGGAAAAGGCTCCCGCCGATGCCGGCGAAGAAAAGGTCGTGCGGGTGCCGCGCAAGCCGGGCGACCGCAAGGCCAAGCACGACGCGGCCGCGAAGCGCGCCCGTCCGGGCCGCGCCGAGCGCGCGGCCGGCGAGCAGGCGGCCGAACGGCCCCGCCGCGAGTGGAAGCCGCGGCCGGAGGGCGAGGAGCGCCCCAAGCGCGAGTTCAAGCCGCGCGGCGAGGGCGCCGAACGCCCCGCGCGGGACTGGAAGGCGAAGCCGCCGCGGCCGGGCAGGGCCGAGCGCGCCGCCGCCAGGGAAGGCGGCGAGGCGCCGCAGCGCGAATATCGGCCGCGCCCGCAGAAGCACGACGGCGAGGATGCGCGTCCGCCGCGCAGTCCGCGCCCCGAAGGGGGTGAGCGCCGCCCCTACGAGAAACGCGAGGGAAAGCCGTTCGAGAAGCGCGAGCGCAAGCCGTGGGACGGCGCGGCGTCGAAGTCTTCCTCTCCCCGCGGACGGGGAGAAGGGGGAAAGCCGGCGCGGCCCGGCGCAAACCGCTCCGGCCCGCGCAAGGGGCCGCCCAAGGGACCGCCCAAGGGACCGCCCAAGGGACCGCCAAGGGGCGGGAAGAAGACCTAG
PROTEIN sequence
Length: 222
RSRTSNVWMAPGARPQPEKAPADAGEEKVVRVPRKPGDRKAKHDAAAKRARPGRAERAAGEQAAERPRREWKPRPEGEERPKREFKPRGEGAERPARDWKAKPPRPGRAERAAAREGGEAPQREYRPRPQKHDGEDARPPRSPRPEGGERRPYEKREGKPFEKRERKPWDGAASKSSSPRGRGEGGKPARPGANRSGPRKGPPKGPPKGPPKGPPRGGKKT*