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SCN18_26_2_15_R1_P_scaffold_154_23

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(24308..24658)

Top 3 Functional Annotations

Value Algorithm Source
Putative translation initiation inhibitor, yjgF family n=1 Tax=Rhizobium sp. CF080 RepID=J3CX75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 115.0
  • Bit_score: 196
  • Evalue 1.40e-47
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGD89173.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 115.0
  • Bit_score: 201
  • Evalue 3.60e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 114.0
  • Bit_score: 152
  • Evalue 6.60e-35

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGATCAAACGTCACCGCAAGCACCGGATCATGCATGGCGCTGTCGAGCACAACGGGGTGCTCTATGTCGGCGGACACGCGGCAGACGACATTTCGCTGGGTATGAAGGAGCAGACCCGGCAGATTTGCGGCAAGCTCGACAAGCTGCTGGCGGAGCTGGATTCCGACAAGTCACGCATCCTTTCGGCGCGCATCTATCTGAGCGACATGACCCGCAAGGAAGAAATGAACGAGGCGTGGCTGGAATGGATCGACGGCGACGACCTGCCATCACGCGCGACGATCGGCGGCGTCGATCTCGGCGACCCCCGGCGTCTCATCGAAGTGGTCATCATTGCCGCCAAGGCATGA
PROTEIN sequence
Length: 117
MIKRHRKHRIMHGAVEHNGVLYVGGHAADDISLGMKEQTRQICGKLDKLLAELDSDKSRILSARIYLSDMTRKEEMNEAWLEWIDGDDLPSRATIGGVDLGDPRRLIEVVIIAAKA*