ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCN18_26_2_15_R1_P_scaffold_147_6

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(5855..6838)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE0231 related cluster n=1 Tax=unknown RepID=UPI0003CE0231 similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 331.0
  • Bit_score: 547
  • Evalue 5.30e-153
Thioredoxin {ECO:0000313|EMBL:ESW88989.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 331.0
  • Bit_score: 547
  • Evalue 7.50e-153
thioredoxin similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 344.0
  • Bit_score: 540
  • Evalue 1.80e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGAGTGACAACAATCCATTCGGCGGCATGGGCGGCCAGTATGCGACGACCGTGCAATATGGCGGCGGCGATCGCGGCCGTGGCGCCGACGCGGCCAGCCTTGCGCCGGCCGCCGACCTCATCAAGGACACGACGACCGCGGGCTTTGCCGCCGACGTTATCCAGGAATCGCGCCGCCAGCCGGTGCTCGTCGACTTCTGGGCGCCCTGGTGCGGCCCATGCAAGCAACTGACGCCGCTGCTGGAAAAGGCCGTCAAGGCGGCGGGCGGCAAGGTGAAGCTGGTCAAGATGAACATCGACGAGCATCCCTCGGTCGCTGGCCAGCTCGGCATCCAGTCCATCCCGGCGATCATCGCCTTCAAGGACGGGCAGCCGATCGACGGCTTCATGGGCGCGATTCCGGAGAGCCAGATCAACGAGTTCATCAAGAAGGTCGGCGGCAAGGGCAATGGCGCGCCGCAGATTACGGAGGCGCTGGAAGCCGCCGCCGAGGCGCGCGCGGCGGGCGATGCCCAGACCGCGGCCGACATCTACGATGCGATCCTGGCGCAGGCGCCGGAAACGATCGAGGCGATCGCAGGTCTCGCCGAACTGCTGTTCGAGGCGGGCGACGCCGAAGGCGCCGAGGCGGTGCTGGCCAAGGCGCCCGAGGCCAAGAAGGACGCGCCCGCGCTTTCGGCGCTGCGCGCCAAGATGGCGCTGGCCGCGCAGACCGCCGGCCTCGGCAATCCGGCCGAGCTTGAAAAGCGGCTCGCCGAGAACCCCAAGGATCACCAGGCGCGCTTCGACCTCGCCATGATCCAGAACGCCATGGGCGATCGCATGGCGGCGGCCGACAGCCTGCTGGCCATCGTCAAGGCTGACCGTGCCTGGAACGACGACGGCGCCAGGGCGCAGCTGCTGCAGTTCTTCGAGGCCTGGGGCATGACCGACGAGGCGACGCTTTCGGCCCGCCGCAAGCTGTCGTCGCTGCTGTTTTCGTAA
PROTEIN sequence
Length: 328
MSDNNPFGGMGGQYATTVQYGGGDRGRGADAASLAPAADLIKDTTTAGFAADVIQESRRQPVLVDFWAPWCGPCKQLTPLLEKAVKAAGGKVKLVKMNIDEHPSVAGQLGIQSIPAIIAFKDGQPIDGFMGAIPESQINEFIKKVGGKGNGAPQITEALEAAAEARAAGDAQTAADIYDAILAQAPETIEAIAGLAELLFEAGDAEGAEAVLAKAPEAKKDAPALSALRAKMALAAQTAGLGNPAELEKRLAENPKDHQARFDLAMIQNAMGDRMAAADSLLAIVKADRAWNDDGARAQLLQFFEAWGMTDEATLSARRKLSSLLFS*