ggKbase home page

SCN18_26_2_15_R1_P_scaffold_120_149

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(169616..170014)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B67E49 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 130.0
  • Bit_score: 177
  • Evalue 5.90e-42
Protein containing PilT protein {ECO:0000313|EMBL:EQD25940.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 131.0
  • Bit_score: 174
  • Evalue 5.30e-41
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 130.0
  • Bit_score: 171
  • Evalue 1.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGAAAATCATCGCAGACACGAACATTCTCGTCCGGGCTGTCGTTCGCGATAACGAGAAGCAGGCAAATGCCGCCGACAATATCCTCAGAAACGCGACATTGATCGCGGTATCGCCGCCTTGCCTTTGCGAGTTCGCCTGGGTTCTACAGAGACTCTATCGCTTCGATGCGATGTCCGTTGCCCAGGCAATCCGCGCATTGCTCGACACCGAAAAAGTGGTGATGAACAGACCGGCGGTCGAGGCCGGACTGGCGATCCTCGAGGCCGGCGGCGATTTCGCCGACGGCGTCATGGCCTACGAAGGCAACTGGCTGGGTGGCGAAATCTTCGTCTCTTTCGACAAAAATGCCACCAAACTGCTTGCGGCCCAGGGACAGTCCGTCCATGTGCCGGGTTGA
PROTEIN sequence
Length: 133
MKIIADTNILVRAVVRDNEKQANAADNILRNATLIAVSPPCLCEFAWVLQRLYRFDAMSVAQAIRALLDTEKVVMNRPAVEAGLAILEAGGDFADGVMAYEGNWLGGEIFVSFDKNATKLLAAQGQSVHVPG*