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SCN18_26_2_15_R1_P_scaffold_364_26

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 29993..30931

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C434_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 308.0
  • Bit_score: 397
  • Evalue 8.50e-108
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EYR79239.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 308.0
  • Bit_score: 397
  • Evalue 1.20e-107
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 308.0
  • Bit_score: 386
  • Evalue 5.60e-105

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGAACTTAAATGGCTCGAGGATTTCGTTGCCGTCGCGGAAACTTTTAGCTTTTCACGGGCGGCGGAGATTCGACACGTCACCCAGTCGGCGTTGAGCCGCCGCATCAAGCAGTTGGAGGCCTGGCTCGGCGCGACCCTGATCAGCCGTGCGACCATGCCCGCGGAGCTCACGCCTGCCGGGAGGACCTTCCTGCCGGTCGCGCGCGAGCTCATCCGCACATTCTACATTTCCAGGGAAATGCTGCAGCCGGTCGCGGAGCCGGGGCTGATCCGGCTGGCCGCGCTCCATACCTTGACGGTCACCTTCTTTCCCAATTGGCTTCGCGGCCTCGAGGCGGAGATGCCGGGTCTGCGGACGTCGCTCATTCCCGACCGTGGTGGGATCGAGGCGAACCTTGCCGCATTGACCGACGGCGAGGCGGATTTCTTCCTGACCTATGCGCATCACGACGTGGCCTTCCACCTCGATCGGGAACGCTTCGATTTCATGGTCATCGGCAATGACAAGGTGATCCCGGTGAGCGCGCCGGAGCTTCGCATCCGCAATCAGCTCGTGCCTGGCGCCCGTTTGCTCGAGCGGGCGGTGGCTGGTCGCGTTGCCGTGCCCTATCTCAGCTACGGTTTCAGTTCCTTCTTCGGCGTGGCGCTGCAGCGCCTCTTTGCCACGAGACCCGATTTCCTCCGCCGCACCGTGCACGAGAACACCATCAGCGCCGGCCTGAAGACCCTGGCCCTAACAGGGACGGGGCTGTGCTGGCTTCCGGAGAGCCTGATTGAGGGCGAACTGCGAGCCGGGTCGCTTGTGCCTGCGGCGGAGGGCGACGACTGGCAACTCGACCTCGAGATCCGCCTGTATCGCACGCTTGACGGCATCACTCCCGTCACTGACACCTTTTGGAAAGCCGCGAAGACAATCGTTGGCACGCCGCAAAAATAG
PROTEIN sequence
Length: 313
MELKWLEDFVAVAETFSFSRAAEIRHVTQSALSRRIKQLEAWLGATLISRATMPAELTPAGRTFLPVARELIRTFYISREMLQPVAEPGLIRLAALHTLTVTFFPNWLRGLEAEMPGLRTSLIPDRGGIEANLAALTDGEADFFLTYAHHDVAFHLDRERFDFMVIGNDKVIPVSAPELRIRNQLVPGARLLERAVAGRVAVPYLSYGFSSFFGVALQRLFATRPDFLRRTVHENTISAGLKTLALTGTGLCWLPESLIEGELRAGSLVPAAEGDDWQLDLEIRLYRTLDGITPVTDTFWKAAKTIVGTPQK*