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SCN18_26_2_15_R1_P_scaffold_748_13

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(12128..16264)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 1378.0
  • Bit_score: 2670
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 1378.0
  • Bit_score: 2670
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=2 Tax=Mesorhizobium RepID=RPOB_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 1378.0
  • Bit_score: 2670
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4137
ATGGCCCAGACCCAGACTTTCAATGGCCGCAGACGCGTACGCAAGTTCTTCGGAAAGATTCCGGAAGTTGCGGAAATGCCGAACCTCATCGAGGTTCAAAAGGCATCTTACGACCAGTTCCTGATGGTGGATGAGCCCGAGGGCGGCCGTCCCGACGAAGGGCTGCAGGCCGTTTTCAAGTCGGTCTTCCCGATCTCCGATTTTTCCGGCTCCTCGATGCTGGAGTTCGTGAAGTACGAGTTCGAAGGACCGAAATTCGACGTCGACGAATGCCGTCAGCGCGACCTGACCTATGCCGCGCCGCTGAAGGTGACGCTGCGCCTTATCGTGTTCGATATCGACGAGGATACCGGCGCGAAGTCGATCAAGGACATCAAGGAGCAGGACGTGTACATGGGCGACATGCCGCTCATGACGCTGAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGTCTCGCAGATGCACCGCTCGCCGGGCGTCTTCTTCGATCATGACAAGGGCAAGTCGCATTCGTCGGGCAAGCTGCTGTTTGCCGCGCGCGTCATCCCCTATCGCGGCTCCTGGCTCGACATCGAGTTCGATTCCAAGGACGTCGTGCACGCCCGCATCGACCGTCGCCGCAAGATTCCGGTGACGTCGCTGCTGATGGCGCTGGGCATGGACGGCGAGGAGATCCTCTCGACCTTCTACAACAAGATCACCTACCAGCGCGCCGGCGACCACTGGCGTATTCCCTTCAACGTCGAGCGCTTCCGTGGCCTCAAGGCCGTTGGCGACCTCGTTGATGCCGACACCGGCGAGATCGTCGTCGAGGCGGGCAAGAAGATCACCGCCCGCCAGGCGCGTCAGCTTGCCGAGAAGGGCCTCAAGGCGATCAAGGCGACCGACGAGGACCTGCTCGGCAACTACCTCGCCGAGGACATCGTCAACTACGCCACCGGCGAGATTTTCCTCGAGGCTGGCGACGAGATCGACGAGAAGACGCTGAAGGTGCTCCTCGGTACCGGCGAGCAGGAAGTGAACGTTCTCGACATCGACCACGTCAATGTCGGCGCCTACATCCGCAACACGCTCAATGCCGACAAGAACGAGAGCCGCCAGGACGCGCTGTTCGACATCTACCGCGTGATGCGCCCGGGCGAGCCGCCGACGCTGGAGACCGCCGAAGCCATGTTCAACTCGCTGTTCTTCGACAGCGAGCGCTATGACCTGTCGGCTGTCGGCCGCGTCAAGATGAACATGCGCCTCGAGCTCAAGGCCGAGGACACCGTGCGCGTGCTGCGCAAGGAGGACATCCTTGCCGTGGTCAAGACGCTGGTCGAGCTGCGTGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGCCGCGTGCGCTCGGTCGGCGAGCTCATGGAGAACCAGTACCGCGTCGGCCTGCTGCGCATGGAGCGCGCGATCAAGGAACGCATGTCCTCGATCGAGATCGACACGGTGATGCCGCAGGATCTGATCAACGCCAAGCCGGCGGCCGCCGCCGTGCGCGAGTTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGACGAACCCGCTGTCGGAAATCACCCACAAGCGCCGCCTGTCGGCGCTTGGCCCGGGCGGTTTGACGCGTGAGCGCGCCGGCTTCGAGGTGCGCGACGTTCACCCGACGCATTATGGCCGTATCTGCCCGATCGAAACGCCGGAAGGCCCGAACATCGGTCTGATCAACTCGCTGGCCACTTTCGCGCGCGTCAACAAGTACGGCTTCATCGAGAGCCCGTACCGCAAGATCGTCGACGGCAAGCTGACCAACGAAGTCGTGTATCTGTCGGCCATGGAAGAGGCCAAGCACCACGTCGCGCAGGCCAACGCCGAGCTCGACAAGGACGGTCGTTTCGTCGACGAGTTCGTCATCTGCCGCAGCGCCGGCGAAGTGATGATGGCGCCGCGCGAGAACGTCGACCTGATGGACGTGTCGCCGAAGCAGATGGTCTCGGTCGCCGCGGCGCTGATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGTCAGGCCGTGCCGCTGGTGCGCGCCGAGGCGCCGTTCGTCGGCACCGGCATGGAGCCGGTCGTCGCTCGTGACTCCGGCGCCGCCATCGGCGCCCGTCGCGGCGGCATCGTCGACCAGGTGGACGCGACGCGTATCGTCATCCGCGCCACGGAAGATCTCGATCCCGGCAAGTCCGGCGTCGACATCTACCGGCTGATGAAGTTCCAGCGTTCCAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGCGTATGGGTGATCGCGTGAACAAGGGCGACATCATCGCCGACGGTCCGTCGACGGAGCTCGGCGATCTGGCGCTCGGCCGCAACGTGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTACGAGGACTCGATCCTGCTCTCCGAGCGCATCGTGGCCGACGACGTCTTCACCTCGATCCACATCGAGGAGTTCGAGGTCATGGCCCGCGACACCAAGCTCGGGCCGGAGGAAATCACGCGCGACATTCCGAACGTTTCGGAAGAGGCGCTGAAGAACCTCGACGAGGCCGGCATTGTCTATATCGGCGCCGAAGTGCAGCCGGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTTCTGCGCGCCATCTTCGGCGAGAAGGCCTCCGACGTGCGCGACACGTCCATGCGCATGCCTCCGGGCACCTTCGGCACGGTCGTCGAAGTGCGCGTCTTCAACCGCCACGGCGTTGAGAAGGACGAGCGCGCCATGGCCATCGAGCGCGAGGAGATCGAGCGTCTCGCCAAGGACCGTGACGACGAGCAGGCGATCCTCGACCGCAACGTCTATTCGCGCCTTTCCGACATGCTCGTCGGCAAGGATGCGATTGCAGGGCCGAAGAGCTTCAAGAAGGGTTCGAAGCTTTCCAAGGAACTGCTCGACGAGTATCCGCGTTCGCAGTGGTGGCAGTTCGCCGTCGAGGACGAAAAGCTCCAGGGCGAACTGGAAGCTCTGCGTGGCCAGTACGACGACTCCAAGAAGGCGCTCGAGCAGCGCTTCATGGACAAGGTCGAGAAGGTGCAGCGCGGCGACGAAATGCCTCCGGGCGTCATGAAGATGGTCAAGGTCTTCGTGGCCGTGAAGCGCAAGATGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGTGTCGTGTCGCGCATCGTTCCGGTCGAGGACATGCCTTTCCTCGAGGACGGCACGCATGCCGACATCGTGCTCAACCCGCTGGGCGTGCCGAGCCGCATGAACGTAGGCCAGATCCTGGAGACGCATCTGGGCTGGGCCTGCGCCGGCATGGGCAGGAAGATCGGCGAGCTGATCGACGCCTACAAGGCGGGCGGCGACATCAAGCCGCTGCGCAAGACGCTGGAGAGCTTCATGCCGGCCAACGACCGCAACGAGCCGATTCGCGAATACGACGACGAGAGCATCATTCGCCTCAGCGAACAGATGCGTCGCGGCGTCTCCATCGCGACACCGGTGTTCGACGGCGCGCACGAGGTCGACATCAACACCATGCTGGAGCAGGCTGGCCTGCACACCAGCGGGCAGTCGCAGCTCTATGACGGCCGCACCGGCGAACCTTTCGATCGCAAGGTGACGATGGGCTACATCTACATGCTGAAGCTCCATCACCTCGTGGACGACAAGATTCACGCGCGTTCGATCGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGTCAGCGCTTCGGCGAAATGGAGGTCTGGGCGCTGGAAGCCTACGGCGCCGCCTACACGCTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTGGCGGGCCGCACCAAGGTCTACGAGGCGATCGTGCGCGGCGACGACACGTTCGAGGCAGGCATTCCGGAGAGCTTCAACGTGCTCGTCAAGGAAATGCGCTCCCTGGGCCTCAACGTCGAACTGGAGAACACCAAGTTCGAGGACGCACAGACCCGTCTGCCCGACGCGGCCGAGTAA
PROTEIN sequence
Length: 1379
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPEGGRPDEGLQAVFKSVFPISDFSGSSMLEFVKYEFEGPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAKSIKDIKEQDVYMGDMPLMTLNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYNKITYQRAGDHWRIPFNVERFRGLKAVGDLVDADTGEIVVEAGKKITARQARQLAEKGLKAIKATDEDLLGNYLAEDIVNYATGEIFLEAGDEIDEKTLKVLLGTGEQEVNVLDIDHVNVGAYIRNTLNADKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDSERYDLSAVGRVKMNMRLELKAEDTVRVLRKEDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIVDGKLTNEVVYLSAMEEAKHHVAQANAELDKDGRFVDEFVICRSAGEVMMAPRENVDLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPVVARDSGAAIGARRGGIVDQVDATRIVIRATEDLDPGKSGVDIYRLMKFQRSNQNTCINQRPLVRMGDRVNKGDIIADGPSTELGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIEREEIERLAKDRDDEQAILDRNVYSRLSDMLVGKDAIAGPKSFKKGSKLSKELLDEYPRSQWWQFAVEDEKLQGELEALRGQYDDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWACAGMGRKIGELIDAYKAGGDIKPLRKTLESFMPANDRNEPIREYDDESIIRLSEQMRRGVSIATPVFDGAHEVDINTMLEQAGLHTSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTKFEDAQTRLPDAAE*