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SCN18_10_11_15_R1_B_scaffold_889_2

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(338..1975)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, polymerase domain protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHK0_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 562.0
  • Bit_score: 755
  • Evalue 2.20e-215
DNA polymerase LigD, polymerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 562.0
  • Bit_score: 755
  • Evalue 6.10e-216
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:CCB65650.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 562.0
  • Bit_score: 755
  • Evalue 3.00e-215

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1638
GTGGCCCGCACGAAGCTCACCGAGTACCGCGCACGCCGCGATTTCACCAAGACTGACGAGCCGAGCGGCAGGAGCGCGATCAAGCCTGCCGAGTACCCGCGCTTCGTCATCCAGAAACATGATGCGACGCGCCTTCACTACGACCTGCGTCTCGAGGTCGACGGCGTGTTCAAGTCGTGGGCGGTGACGCGAGGCCCATCGCTCGACCCGAGCGACAAGCGTCTCGCCGTCGAGGTGGAGGATCACCCGCTCGACTACGGAGATTTCGAGGGCACCATCCCGGAGGGCGAGTACGGCGGCGGCACGGTCATGCTGTGGGACCGCGGCTTCTGGATGCCCGAAGGCAACGAGCCCGCAAACGAAATGCTGCGCGATGGCGAGCTGAAGTTCGTGGTGGCCGGCGAGAAGCTCAAGGGAAGCTGGGTGCTCGTGCGCATGTCGGGCGACCGCTACGGCGGCAAGCGCACGAACTGGCTGCTCATCAAGCATCGCGACAAGTGGGCCCGCGCGAAATCGCAAGGCGATGTGCTCAAGAAGGATCGCTCCGTCGCATCCGGCCGCACGATGGGGCAGATCGCGGCAGGCAAGGGCGAGAGCCCATCGGCCTTCATGAGCGGACGCGGTCGCGCCTTCAAGCCCGATGCCGTGTGGAGCACGACCAACAAGCCGGCGACCCCGACGCGCCGCGTCGCCGCACGCGCGACCAGCAGCGTCAAGCGCGCACGTCGCAGCGAAGGTGGCGACGATCCCGTGCTCGGCATTGCGATCTCCAAACCGGACAAGGTGCTTTGGCCGGCAAGCGGCGACACGCCCGCTATCAGCAAGCTCGATCTCGCACACTATCTCGCCGAGATCGGCCCATGGATGCTCCCGCACATCGCGGGCCGGCCGTGCTCGCTCTTGCGCGCGCCCGACGGCATCGACGGCCAGACCTTCTTCCAGCGTCACGCCACGCGCGGCCTCGAGGAAATCACCGAGATCAAGATCTCGGGCGACAGCCAGCCCTATGTCCAGATCGACACGGTCGAAGGGCTCATCGCCATGGGCCAGTTGGGCACCCTCGAATTCCACCCCTGGAACAACGCCCCCGACAAGCCCGACGTACCGGGCCGCCTCGTGTTCGACCTCGACCCCGGCCCCGACGTGCCCTTCGACAACGTCGTCGCCGCCGCGCGCGAGCTCAAGTCGCGCATCGAGGACTGCGGCCTCGTCGCCTTCTGCAAGACCACCGGCGGCAAAGGCCTGCACGTGGTCACGCCCTTGCGGACGACGGCGCGCGATGAGATCGGCTGGGACGCGTCCAAGATGTTCGCGCAGACCATCTGCGCGAGCATGGCCGAAGCACAGCCCGACCGCTACCTCATCAAGATGACGAAGGCCCTGCGCGGCGGACGCATCTTCCTCGACTATCTGCGCAACGACATGAAGGCGACCGCGGTGGCCCCGCTCTCGCCGCGCGCGCGTCCCGGCGCAACGGTGTCCATGCCGCTCACCTGGCAGCAGGTGCGCCCCGGTCTCGACCCCAAGCGCTTCACGATGCGGACCGTTCCGAAGTTGCTCGCGCGGTCGGCAGCCTGGCGCGACTACGACAAGAGTGCGCGATCGCTGAAAGCCGCCATCAGGAAGCTGGTCGCATAG
PROTEIN sequence
Length: 546
VARTKLTEYRARRDFTKTDEPSGRSAIKPAEYPRFVIQKHDATRLHYDLRLEVDGVFKSWAVTRGPSLDPSDKRLAVEVEDHPLDYGDFEGTIPEGEYGGGTVMLWDRGFWMPEGNEPANEMLRDGELKFVVAGEKLKGSWVLVRMSGDRYGGKRTNWLLIKHRDKWARAKSQGDVLKKDRSVASGRTMGQIAAGKGESPSAFMSGRGRAFKPDAVWSTTNKPATPTRRVAARATSSVKRARRSEGGDDPVLGIAISKPDKVLWPASGDTPAISKLDLAHYLAEIGPWMLPHIAGRPCSLLRAPDGIDGQTFFQRHATRGLEEITEIKISGDSQPYVQIDTVEGLIAMGQLGTLEFHPWNNAPDKPDVPGRLVFDLDPGPDVPFDNVVAAARELKSRIEDCGLVAFCKTTGGKGLHVVTPLRTTARDEIGWDASKMFAQTICASMAEAQPDRYLIKMTKALRGGRIFLDYLRNDMKATAVAPLSPRARPGATVSMPLTWQQVRPGLDPKRFTMRTVPKLLARSAAWRDYDKSARSLKAAIRKLVA*