ggKbase home page

SCN18_10_11_15_R1_B_scaffold_810_19

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 18039..18512

Top 3 Functional Annotations

Value Algorithm Source
Rrf2 family transcriptional regulator (EC:2.8.1.7) similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 152.0
  • Bit_score: 161
  • Evalue 1.10e-37
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000364C862 similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 124.0
  • Bit_score: 164
  • Evalue 8.00e-38
DNA-binding transcriptional repressor (Modular protein) {ECO:0000313|EMBL:CPR15321.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 140.0
  • Bit_score: 182
  • Evalue 4.00e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGAACTGAACACCAAAGGGCGGTACGCCGTGATGGCGATGGCGGACCTCGCCAGCCAGCGCGCCAGCGATGCGACCCCCCTCCCGGCGATTGCCGAGCGTCAGCAGATCTCGATCGCCTACCTCGAGCAGATCTTCATCCGCCTGCGCCGCGCCGGCCTTGTCGAGAGCGCCCGCGGCCGTGCCGGCGGCTACCGGCTCGCCCGACCGGCCGCCGAGATCGTGATCGCCGACATCATGTCGGCCGTCGAGGAAGACACCCGCATGACGCGCTGCCGGGGCGAGGACGGTGCGCCGTGCCTCCCCGGACACCGCTGCCTCACGCACAATCTCTGGGAGGCCCTTGGCGCCCAGATCGCGGGCTTCCTCTCGACCGTAACCCTGAAGGACGTGCTCGACGGCCTGCCCGCCCATCGCGGCCGGCCCGCTGTCGAGGCCTTCATCAGCCCATCCGAGGTGCGGACCGCGCGATGA
PROTEIN sequence
Length: 158
MELNTKGRYAVMAMADLASQRASDATPLPAIAERQQISIAYLEQIFIRLRRAGLVESARGRAGGYRLARPAAEIVIADIMSAVEEDTRMTRCRGEDGAPCLPGHRCLTHNLWEALGAQIAGFLSTVTLKDVLDGLPAHRGRPAVEAFISPSEVRTAR*