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SCN18_10_11_15_R1_B_scaffold_3191_5

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 5074..5685

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01031};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 201.0
  • Bit_score: 339
  • Evalue 2.50e-90
3-isopropylmalate dehydratase small subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=LEUD_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 201.0
  • Bit_score: 339
  • Evalue 1.80e-90
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 201.0
  • Bit_score: 339
  • Evalue 5.10e-91

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Taxonomy

CN-SCN_Mesorhizobium_20x → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGACAAATTCACGCAACTGACCGGCGTCGCCGCCCCGATGCCGGAGATCAATATCGACACCGACCGGATCATTCCGAAGAACTACCTGAAGACTATCAAGCGGACCGGTCTCGGCACGGCTGCGTTCGCCGAGGTGCGCTACGACGAAAACGGCAAGGAAAACCCGGATTTCGTTCTCAATAAGCCCGCCTATCGCAAGGCGCAGATCCTCGTCACGGGCGAGAACTTCGGCTGCGGCTCGAGCCGCGAGCACGCCCCCTGGGCGCTTCTCGACTTCGGCATCCGCTGCGTCATCTCGCCGTCATTCGCCGACATCTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCCATCAAGCTGCCGCAGGAAGACGTCGACAAGCTGATGGACGACGCCGGGCGCGGCGCGAATGCGGTCATCACCGTCGACCTCGAGAAGCAGGAAATCCGCGGCCCCGATGGCGGCGTGGTCAAGTTCGACATCGATCCCTTCCGCAAGCATTGCCTGCTGAACGGCCTCGACGACATCGGCCTGACGCTTCAGCACGAGAAGCAGATCAGCGACTACGAGAGCCGCCAGAACGCCGACAAGCCCTGGCTCGCGGCTTAG
PROTEIN sequence
Length: 204
MDKFTQLTGVAAPMPEINIDTDRIIPKNYLKTIKRTGLGTAAFAEVRYDENGKENPDFVLNKPAYRKAQILVTGENFGCGSSREHAPWALLDFGIRCVISPSFADIFYNNCFKNGILPIKLPQEDVDKLMDDAGRGANAVITVDLEKQEIRGPDGGVVKFDIDPFRKHCLLNGLDDIGLTLQHEKQISDYESRQNADKPWLAA*