ggKbase home page

SCN18_10_11_15_R1_B_scaffold_1394_11

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 11612..11890

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGC9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 71.0
  • Bit_score: 105
  • Evalue 2.60e-20
Uncharacterized protein {ECO:0000313|EMBL:CPR21134.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 92.0
  • Bit_score: 116
  • Evalue 1.60e-23
membrane protein similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 71.0
  • Bit_score: 105
  • Evalue 7.30e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGAGCCTGACGCTGGGGCTGGCGCTCTACTTCATCATCTGGTGGACGGTGCTGTTTGCCGTGCTGCCGTTTGGCGTGCGCACGCAGGGCGAGGTGGGCGAGATCGTCCCCGGCACGCCGGAGAGCGCGCCTGTAGCGCCGCGTTTGCTGCGGACGTTCGCCATCACGACGGTACTCGCCGGGGCGGTATTCGCTCTGGTCTATGCGGTTCTTGCGGGCGGCCTTATCGACGTCGGCGCCTATTTCCCCGATCCAGTGGCCCCGCCAGGCGTGCGCTGA
PROTEIN sequence
Length: 93
MSLTLGLALYFIIWWTVLFAVLPFGVRTQGEVGEIVPGTPESAPVAPRLLRTFAITTVLAGAVFALVYAVLAGGLIDVGAYFPDPVAPPGVR*