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SCN18_10_11_15_R1_B_scaffold_3967_6

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 4932..5558

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 164.0
  • Bit_score: 217
  • Evalue 1.50e-53
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 182.0
  • Bit_score: 209
  • Evalue 4.80e-52
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B452D similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 171.0
  • Bit_score: 220
  • Evalue 1.20e-54

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGGTGACGTGAATAGCGAAGTAAAACAAGCGTGCGTCATTGGCTGGCCGATCGAGCAATCCCGCTCGCCGCTCATTCATGGCCACTGGCTGAAGACCTACGGCATTGCCGGGCGCTACGACCGGGTCGCTGTGCCGCCGGGTGAGGCTGCAGCCTTTATTCACTCGCTCGAGGCGCGCGGCCTCGAAGGCTGCAACGTCACGGCACCCCACAAGCAGGCCGTCTTCGAGGCAGCCGACTGGCGTGATTCCTCCGCCGAGGCCGTCGGCGCCGCCAATACCGTGTGGCGCGAGGGCGGCAAGGTCTGCGTGGCCAATACGGACACCTACGGATTCATGACGCATCTCGCCCAGTCGGCCCCCGGCTGGGACAAGCGGGACGCGCCCGTCGCGCTCTTTGGCGCCGGTGGGGCAGCGCGCGCCATCGTCTATGGCTTCCTCGATGCCGGTGTGGATCTGGTTCGCCTGATCAACCGGACGCCCGAGCGTGCCGAGACCGCGCGTCGAGAGCTGTGCCTGGTCGGACCGCGCGCGGGGCGTCTCGGACGCCGGCGTCGTCGTCAACACGACAACGCTTGGAATGATCGGCAATGCACCGCTCGACCTCGATCTTTCCGCGCTCGATAG
PROTEIN sequence
Length: 209
MGDVNSEVKQACVIGWPIEQSRSPLIHGHWLKTYGIAGRYDRVAVPPGEAAAFIHSLEARGLEGCNVTAPHKQAVFEAADWRDSSAEAVGAANTVWREGGKVCVANTDTYGFMTHLAQSAPGWDKRDAPVALFGAGGAARAIVYGFLDAGVDLVRLINRTPERAETARRELCLVGPRAGRLGRRRRRQHDNAWNDRQCTARPRSFRAR*