ggKbase home page

SCN18_10_11_15_R1_B_scaffold_7247_1

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(3..440)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J585_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 146.0
  • Bit_score: 247
  • Evalue 5.10e-63
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 146.0
  • Bit_score: 247
  • Evalue 1.40e-63
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 146.0
  • Bit_score: 247
  • Evalue 7.20e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGCGTTCCGGAGTGATTGCACAGAAGGTCGGCATGACGCGGCTCTTCACGGAGACCGGGGAGCATATCCCCGTGACCGTGCTGAAGCTCGACAACCTGCAGGTCGTCGGCCACCTGACGCAGGAAAAGAACGGCTACACCGCGCTCCAGCTCGGCGCTGGCAAGCGCAAGCCGAACCGCGTGACCAAGGCCGAGCGCGGCGGTTTCGCGCGCGCCGAGGTCGAGCCGAAGCGCAAGCTCGCCGAGTTCCGCGTGAGCCCGGAAAACCTGATCGAAGTCGGCGCCGAGATCACGGCCGACCACTTCGTCGCCGGCCAGCTCGTCGACGTGACGGGCCAGAGTCAGGGCAAGGGCTTCCAGGGCGGCATGAAGCGCTGGAACTTCGGCGGTATGCGCGCAACGCACGGCGTCTCCGTCGTGCACCGCGCGCTCGGCTCG
PROTEIN sequence
Length: 146
MRSGVIAQKVGMTRLFTETGEHIPVTVLKLDNLQVVGHLTQEKNGYTALQLGAGKRKPNRVTKAERGGFARAEVEPKRKLAEFRVSPENLIEVGAEITADHFVAGQLVDVTGQSQGKGFQGGMKRWNFGGMRATHGVSVVHRALGS