ggKbase home page

SCN18_10_11_15_R1_B_scaffold_4360_1

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 3..308

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF4E17 related cluster n=1 Tax=unknown RepID=UPI0003CF4E17 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 149
  • Evalue 1.00e-33
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ESY99607.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 149
  • Evalue 1.40e-33
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 101.0
  • Bit_score: 148
  • Evalue 8.20e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
CAGATCGGCCAGGTGGCTTATGCGGCGTCGAAGGGCGGCGTGAAATCCATGGTTCTGCCGGTGGCGCGCGATCTCGCCCAGAGCGGCATTCGCGTGTGCGCCATCCTGCCGGGCCTCTTCCACACGCCCATGTTCGACGGCCTGCCCGAGGATGCGCGCAAGGCGCTTGCGGCCTCCGTGCCCTTCCCCTCGCGCCTCGGCAGCGCGACGGAGTACGCGGCACTCGCGACGCACATCTGCGAGAACGTGATGCTCAACGGCGAATGCATCCGCCTCGACGGCGCCATCCGCCTCGCACCGCGGTAA
PROTEIN sequence
Length: 102
QIGQVAYAASKGGVKSMVLPVARDLAQSGIRVCAILPGLFHTPMFDGLPEDARKALAASVPFPSRLGSATEYAALATHICENVMLNGECIRLDGAIRLAPR*