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SCN18_10_11_15_R1_B_scaffold_6348_1

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(2..388)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family protein n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U2E8_RHOSH similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 131
  • Evalue 4.70e-28
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 131
  • Evalue 1.70e-28
Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence {ECO:0000313|EMBL:ABA81040.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 131
  • Evalue 8.60e-28

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGAAGACCCGCTTTCTCGAGAGCTTGGTCGCAGTCGCTGAGTGTGGTTCGATGGCGGGGGCCGCCCGCCGTCTCAATTTGACGCCTGCCGGCGTGAACCAGCAAATCCGTGCTCTCGAGAACGAAATCGGCACCCGCCTCCTCGTCCGCTCCGGTCGGGCCGTACGGCCGACGCCCGCGGCGGCGTCAATCCTCGACCGGGCTCGATCTGTGCTCGGAGAGGTGCGGGACATGAAGTCGATCGCCGCGAGCGGCGAGCTTTCGGGCGAGCTTCGGCTCGGCGTAATGCAGACGACGCTCTCGGGCATGTTTCCGGACATGCTCATTCCGTTCATGAAGGCGCATCCGCGGATCGAGGTGCGCATCCTTCGCGACAACTCGGCAGGG
PROTEIN sequence
Length: 129
MKTRFLESLVAVAECGSMAGAARRLNLTPAGVNQQIRALENEIGTRLLVRSGRAVRPTPAAASILDRARSVLGEVRDMKSIAASGELSGELRLGVMQTTLSGMFPDMLIPFMKAHPRIEVRILRDNSAG