ggKbase home page

SCN18_10_11_15_R1_B_scaffold_12841_1

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(1..1287)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAQ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 378.0
  • Bit_score: 308
  • Evalue 7.20e-81
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 378.0
  • Bit_score: 308
  • Evalue 2.00e-81
Polysaccharide deacetylase {ECO:0000313|EMBL:AHB47831.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 378.0
  • Bit_score: 308
  • Evalue 1.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGCGTACCGCCGCGCCCCAGGGCTCACGGCGGTCTGGGGTCAGACCGGTCAACATGTCCGAAAAGAGCAAGCAGGTTTTCTTCGACGCCTCGGGGCGCCGCTCACCAGTCGTTTACGGCCTCGTCGGCCTTCTGGTCGCCTTCATCGGCGCGCTGGTGACGGTCTTCAGCATCAGCGTCGCGACGACGCCGGCACTTCCGTCGGTGAAACTCAATCTCGAGCGGGAGTACCTGTCCGTGCTCGCCGTCGCACACCGCACGCCGGTGCGCGGCCCCGCAGTCAACCTCGCGCACGCTCGCTCGCGCGTCGACAAGGCGACGTCGGGAACGGATCGCTTCGCCTTCTACGTCAACTGGGACAAGAACAGCTTCCTCTCACTCAGGACTGCGGTGAAGCAGCTCGACGGGCTCATGCCCGAGTGGCTCCACCTCTCCGGCGACCAGGGTGACATCGAGCTCGACGACGAGCGCGAGCAGCAGAACGTCGATGCGTGGCTCACGATCAACGCGCCCGAGCTGAAAGTCATGCCGGTCGTCAACAACTACGACCCGCGCAACGGCGCCTGGCATGGCGAAACCACCGCGCGCGTGCTCAAATCTCCGGAGGCCCGCGCGCGCCTCGTCCGCAATCTCAAGAACTATCTCGCGAAGGGCGATTTCGAAGGCGTCGTGGTGGACTTCAAGGAGGTCCCCGCAGAGGATCAGGAGCATCTCGTCTCGTTTCTGGGCGAGCTGAAGTCCATCCTCGCAGCGGATCGCCGCCAGCTCTTCGCCGTGGTTCCGGCCTATGCGGAGCCGACGCATTTCCACCGGATCATCGAGGCCGTCGACCGCGTCGTCCTCCTCGTCTACGACCAGCACGCTCCCCATGAGCGTCCGGGCCCGATCGCCTCGCAGGTGTGGTTCGAGACGATGCTCGACAAGCACTTCGCGACCACGCACGGCAGCAAGCTGATCGTCGCCATCGGTTCCTACGCCATCGACTGGGACCGCCCGGGCAATGGCCGGATGGCGTCGATCCGCGAGATGTGGGACGTGCTGGACCGCTCAGGCGCCACCTTCACGTTCGACCCGCATGCGCTCAACCCGACATTCTCCTATGGTGAGAAGAGCACCGGCGCGACGCACACTGACTGGATGCTCGACGGCGTCACCATGTACAATCAGGTTGCAGCCGCGCTCGCCATGGAGCCGGCCGGCCTGGCTCTATGGCGGCTCGGCACGGAGGACCCGACGATCTGGTCGACGTTCGCCCGCGGCCGCGCCCCGGATGATGCCGCGCTCGCG
PROTEIN sequence
Length: 429
MRTAAPQGSRRSGVRPVNMSEKSKQVFFDASGRRSPVVYGLVGLLVAFIGALVTVFSISVATTPALPSVKLNLEREYLSVLAVAHRTPVRGPAVNLAHARSRVDKATSGTDRFAFYVNWDKNSFLSLRTAVKQLDGLMPEWLHLSGDQGDIELDDEREQQNVDAWLTINAPELKVMPVVNNYDPRNGAWHGETTARVLKSPEARARLVRNLKNYLAKGDFEGVVVDFKEVPAEDQEHLVSFLGELKSILAADRRQLFAVVPAYAEPTHFHRIIEAVDRVVLLVYDQHAPHERPGPIASQVWFETMLDKHFATTHGSKLIVAIGSYAIDWDRPGNGRMASIREMWDVLDRSGATFTFDPHALNPTFSYGEKSTGATHTDWMLDGVTMYNQVAAALAMEPAGLALWRLGTEDPTIWSTFARGRAPDDAALA