ggKbase home page

SCN18_10_11_15_R1_B_scaffold_14877_1

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 2..349

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 115.0
  • Bit_score: 165
  • Evalue 2.80e-38
Dihydrodipicolinate synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHF7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 115.0
  • Bit_score: 161
  • Evalue 2.90e-37
dihydrodipicolinate synthase similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 115.0
  • Bit_score: 161
  • Evalue 8.20e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
CTTTCGGGCGAGGATGCGACCGCGCTCGGCTACATGGCGCACGGTGGCAATGGCTGCATCTCGGTGACGTCGAACGTCGCGCCGAAGCTCTGCGCCGAGTTCCAGAATGCTTGCCTCGCCGGCAACTTCCGCCGCGCGCTGGAGATCCAGGACATGCTCATTCCGCTCCATGGCGCGCTGTTCTGCGAGACCAATCCGGCGCCGGTCAAGTACGCGGCCTGGCGCCTCGGCGTAATCGAGAGCCCGGATTGCCGTCTGCCGATGGCTCCGCTCACAGATGCGAGCAAGAAGACGGTCGATGCCGCGCTCGCGCACGCCGGCCTGCTCGAGGTGAAAGCCGCCGAGTAG
PROTEIN sequence
Length: 116
LSGEDATALGYMAHGGNGCISVTSNVAPKLCAEFQNACLAGNFRRALEIQDMLIPLHGALFCETNPAPVKYAAWRLGVIESPDCRLPMAPLTDASKKTVDAALAHAGLLEVKAAE*